astir | Automated cell identity from single-cell multiplexed imaging and proteomics 🖥🔬✨
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Nov 16, 2023 - Python
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imaging-mass-cytometry
Here are 6 public repositories matching this topic...
SIMPLI is a highly configurable pipeline for the analysis of multiplexed imaging data.
life-sciences-image
gating
mcd
ome-tiff
imc
histology
image-analysis-workflows
tissue-classification
cell-segmentation
bioimage-informatics
bioimaging
single-cell-analysis
bioimage-analysis
histological-images
immunofluorescence
bioimage-tools
imaging-mass-cytometry
tissue-analysis
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Jul 11, 2023 - R
R package for visualization of highly multiplexed imaging data
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Mar 21, 2024 - R
Spatial analysis toolkit for single cell multiplexed tissue data
tissue
network
spatial-analysis
hotspot
single-cell
heterogeneity
spatial-distribution
cell-cell-interaction
spaital-analysis
imaging-mass-cytometry
multiplexed-ion-beam-imaging
spatial-omics
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May 1, 2024 - Python
Visualisation software for imaging mass cytometry data
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Feb 22, 2023 - Rust
Rust library for reading imaging mass cytometry (IMC) data stored in .mcd files.
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Updated
Feb 21, 2023 - Rust
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