gtex
Here are 30 public repositories matching this topic...
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Jun 23, 2018
Examples on processing and working with TCGA mutation and RNA-Seq data
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May 4, 2019 - R
Blood-based multi-tissue gene expression inference with Bayesian regression
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Aug 13, 2020 - Jupyter Notebook
Healthcare-Researcher-Connector Package: Federated Learning tool for bridging the gap between Healthcare providers and researchers
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Oct 1, 2020 - Jupyter Notebook
tool for continuously integrated meta-resource
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Mar 25, 2021 - Python
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May 13, 2021 - Jupyter Notebook
Multilayer modelling of the human transcriptome and biological mechanisms of complex diseases and traits
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Jun 2, 2021 - Jupyter Notebook
Multithreading, data handling, and file manipulation for the GTExSnake pipeline
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Oct 27, 2021 - Python
Describes how to download RNA-Seq controlled data from GTEx via sra-toolkit and from TCGA via GDC Data Transfer Tool
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Oct 29, 2021
Gene ID Mapping for Genotype-Tissue Expression (GTEx) Data
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Dec 21, 2021 - R
🧬 Tissue-specific gene embeddings trained on GTEx data
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Mar 26, 2022 - R
🩺 Assessing StringTie, Salmon, and Kallisto with simulated RNA-Seq reads with noises introduced in read- and annotation-level.
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May 1, 2022 - Shell
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