Algorithms to emulate the synthesis process of proteins.
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Updated
Jun 7, 2016 - Python
Algorithms to emulate the synthesis process of proteins.
Comparing the effects of MDMA and Venlafaxine on Dark Agouti Rats
A set of Matlab scripts which can simulate temporal traces of DNA using CTMC
Codecademy exercise (JavaScript). Steps are described in the code itself.
Repeated DNA is what makes up a large portion of a species' genome, and some of these DNA elements are able to move within the genome, we refer to them as transposons and retrotransposons. Transposons in the DNA move from one location to another by a duplicating mechanism. When it comes to cancer cells, these DNA transposons can be used to intro…
DNA barcoding analysis pipeline
The Deep Averaging Network (DAN) is a Python implementation of a deep learning model for natural language processing tasks. This repository contains the codebase for building and training DAN models, which are particularly useful for tasks like text classification, sentiment analysis, and more.
Program takes in a string of DNA, and converts it to a protein chain.
Multiple sequence alignment tool that builds on the concept of seed-and-extend algorithms
Get standard bioinformatics stats, and more, for your DNA or RNA sequence.
Web page for assigning taxonomy of microorganisms.
This repository contains python code for the optional parts of labs in my Computations in Genetic Engineering (BME808) course at Ryerson University.
Gibbs 3.2 formerly located at http://ccmbweb.ccv.brown.edu/gibbs/gibbs.html
There are many methods to analyze cell nuclei, but few can detect the presence of DNA damage, without labeling proteins. We have developed a process to detect and classify cell nuclei in the presence of DNA damage. This method uses the morphology of DNA-associated histone proteins, without proteins that specifically label or localize to sites of…
R library for graphical and numerical representation of the DNA/RNA sequences.
Demo version of mardyr2 app hosted on shiny.io
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