Simulation of 2D self-assembly driven by depletion force
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Updated
Jun 1, 2017 - Python
Simulation of 2D self-assembly driven by depletion force
Mutual Dipolar Model and Micro Mutual Dipolar Model
A Matlab code for tracking colloidal fluorescent nanoparticles.
Brownian Disk Lab (BDL) is a Java-based application for the real-time generation and visualization of the motion of two-dimensional Brownian disks using Brownian Dynamics (BD) simulations
Java software for the analysis of image-based experiments of microprobes in suspension
Code to perform chemical MPCD simulations
Stokes flow in doubly periodic, partially or fully confined geometries.
Jupyter Notebook code that analyzes an image or a video compilation of images for colloidal systems. Analyzes pair and triplet correlations, as well as the pair and triplet free energies/potentials of mean force.
Experiments on the effects of confinment on random walks, in order to simulate several situations or colloidal science interest.
A simple simulation of a group of particles in a box, with electromagnetic interactions.
Polydisperse tunable sequential aggregation (PTSA) method for generating a fractal-like aggregate of spheres
This code trains and implements a stochastic physics-informed neural ordinary differential equation (SPINODE) framework on a directed colloidal self-assembly test case.
This code trains and implements a characterization framework based on deep learning for characterizing structural states of colloidal self-assembly systems.
Command-line tool for making charged, patchy Particles
BDHM (Brownian Dynamics with Hydrodynamics and Magnetic forces) combines magnetic dipole interactions and hydrodynamics on the point particle level with a heuristic repulsion model for the spatial expansion of the colloids to imitate the dynamics observed in [1] (see the md file) and to act as a proof of concept of the corresponding results.
PyStokes: phoresis and Stokesian hydrodynamics in Python
The Rheoinformatic lab website
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