HapHiC: a fast, reference-independent, allele-aware scaffolding tool based on Hi-C data

A ToolKit to perform a Meta-analysis of Genome-Wide Association Studies

Mitosis Computer Simulator

An R package for fast and efficient visualizing of GWAS results using Q-Q and Manhattan plots directly from PLINK output files.

This program implements a genetic algorithm for curve fitting using a polynomial equation. The goal is to find the best coefficients for the polynomial equation that minimize the distance between the curve and a given set of data points. The genetic algorithm is used to search for the optimal solution by evolving a population of candidate solutions

Genetic Algorithm Implementation for Ada

Chromosome image processing

Deep learning for rotated object detection in Microscopy

Numerical Encoding for Human Genetic Variants

A Java/Processing implementation of the marching cubes algorithm, including normal averaging. A sequence of binary .png files can be provided to show a 3D render of the resulting polygon.

The script presents a simple way to visualize features on human chromosome ideograms

Paired Genomic Loci Tool Suite

Estimate the ancestor composition of your genome

HMM for annotating coding regions of DNA in S. cerevisiae chromosome III

Detects Outliers and plots genomic clines from BGC output, and extends the plotting functionality of INTROGRESS to Correlate genomic clines and hybrid indices with Environmental Variables

Banding pattern extraction and banding pattern segmentation mask generation for stained banded chromosome images.

DensityMap is perl tool for the visualization of features density along chromosomes

Chromosome missegregation analysis tools for Igor Pro, R and ImageJ