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cellxgene

Here are 2 public repositories matching this topic...

interactivereport / cellxgene_VIP

Enables cellxgene to generate violin, stacked violin, stacked bar, heatmap, volcano, embedding, dot, track, density, 2D density, sankey and dual-gene plot in high-resolution SVG/PNG format. It also performs differential gene expression analysis and provides a Command Line Interface (CLI) for advanced users to perform analysis using python and R.

visualization svg scrna-seq publication-quality-plots seurat scanpy cellxgene cellxgene-vip

Updated Mar 15, 2024
HTML

showteeth / scfetch

Access and Format Single-cell RNA-seq Datasets from Public Resources

geo bam fastq zenodo sra single-cell-rna-seq format-conversion-tool human-cell-atlas cellxgene panglaodb ucsc-cell-browser

Updated May 4, 2024
R

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