A Haskell script that takes in a configuration YAML to create and launch Cell Ranger count and/or vdj runs via LSF bsub commands accordingly.
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Updated
Mar 23, 2021 - Haskell
A Haskell script that takes in a configuration YAML to create and launch Cell Ranger count and/or vdj runs via LSF bsub commands accordingly.
WDLized Cell Ranger Cell Plex
Repository of the master project in Bioinformatics at Lund University
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WDL workflow language program, developed for singlecell rna sequencing data analysis, maintained by @sunhao(OOAAHH)
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scRNA-seq analysis 2022 workshop hosted by UMICH's CDS-SR
Nextflow pipeline wrapper for executing Cell Ranger
simplified cellranger for long-read data
A single-cell RNAseq pipeline for 10X genomics data
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