A collection of UNet and hybrid architectures in PyTorch for 2D and 3D Biomedical Image segmentation
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Updated
Aug 2, 2018 - Python
A collection of UNet and hybrid architectures in PyTorch for 2D and 3D Biomedical Image segmentation
A Curated List of Computational Biology Datasets Suitable for Machine Learning
Knee Osteoarthritis Analysis with X-ray Images using CNN
Machine-learning based pipeline relying on LambdaMART currently used in PubMed for relevance (Best Match) searches
Turning Ontologies Plus Annotation Properties into Vectors
FAIR Dataset Maturity model
A Snakemake workflow for performing differential expression analyses (DEA) on (multimodal) sc/snRNA-seq data powered by the R package Seurat.
Unsupervised domain adaptation method for relation extraction
R package for delineating temporal dataset shifts in Eletronic Health Records
A software package for statistically significant shapelet mining
Analysis code for knowledge discovery project
Image-to-image regression with uncertainty quantification in PyTorch. Take any dataset and train a model to regress images to images with rigorous, distribution-free uncertainty quantification.
UNet based model that segment retina to 8 layers in OCT images
Biomedical Data Science book
It is a Bio-Medical Image based project, where we are testing the diseases through tongue image scanning.
A Python library for biomedical statistical shape and appearance modelling.
A collection of tools for biomedical research assay analysis in Python.
Package for obtaining the referential signal from a set of unipolar iEEG data
Draw periodogram of real EEG data
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