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Machine Learning and Systems Biology Research Department

MLSB Department at the MPI of Biochemistry, Martinsried, Germany

92 followers
Germany
https://www.biochem.mpg.de/borgwardt

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TOGL TOGL Public

Topological Graph Neural Networks (ICLR 2022)

Python 101 19
SAT SAT Public

Official Pytorch code for Structure-Aware Transformer.

Python 221 35

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Showing 10 of 100 repositories

GraphMatchingSubstitutionMatrices Public
Code and Data for the paper: Structure- and Function-Aware Substitution Matrices via Learnable Graph Matching (RECOMB 2024)

Python 2 MIT 0 0 0 Updated Apr 30, 2024
proteinshake-v1 Public Forked from BorgwardtLab/proteinshake
Protein structure datasets for machine learning.

Python 0 BSD-3-Clause 6 14 0 Updated Apr 29, 2024
proteinshake Public
Protein structure datasets for machine learning.

Python 82 BSD-3-Clause 6 83 2 Updated Apr 23, 2024
MultimodalAMR Public

Python 0 1 0 0 Updated Apr 19, 2024
CARPE Public

Jupyter Notebook 0 0 0 0 Updated Apr 1, 2024
WTK Public
A Wasserstein Subsequence Kernel for Time Series.

Python 21 MIT 7 0 0 Updated Feb 16, 2024
DeepEST Public

Python 2 0 0 0 Updated Feb 9, 2024
HOGImine Public
Higher-order genetic interaction discovery with network-based biological priors.

C++ 13 GPL-3.0 1 0 0 Updated Feb 8, 2024
LongCOVID Public
Prediction of long COVID from proteomic and clinical data

Python 1 MIT 0 0 0 Updated Feb 8, 2024
FindComb Public
Scientifica app for finding the most significant combinations of features

Python 3 3 1 1 Updated Feb 7, 2024

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