barcoding
Here are 11 public repositories matching this topic...
Web-app to explore Mycobacterium tuberculosis complex
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Mar 23, 2024 - Python
This repository provides source code for several pipelines dedicated to the alignment of nucleotide coding sequences that are based on MACSE. These pipelines are mostly bash scripts encapsulated within singularity containers and sometimes combined in nextflow workflows.
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Aug 25, 2023 - Shell
A molecular identification toolkit for rattan palms using genome skimming and target capture data.
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May 26, 2023 - Shell
A command-line tool to genotype Mycobacterium tuberculosis lineage from a VCF file
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Apr 6, 2023 - Python
Variant detection and lineage barcoding of Mycobacterium tuberculosis
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Mar 7, 2023 - Python
Code repository for macsGESTALT single cell lineage tracing analysis https://doi.org/10.1101/2020.08.11.245787
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May 10, 2021 - HTML
This repository contains the scripts used to retrieve and analyze the data reported in Porter & Hajibabaei 2018 bioRxiv doi: https://doi.org/10.1101/353904
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Feb 9, 2021 - Perl
A versatile sequenced read processor for nanopore direct RNA sequencing
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May 24, 2020 - Python
Variability measures of DNA barcodes sequences (i.e. Intraspecific and Interespecific)
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Sep 17, 2018 - R
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