Predicting Amino Acids' Dipole Moment Value using SchNet

A tool to find amino acids associated with RNA and DNA nucleotide chains.

Free amino acids in African indigenous vegetables: Analysis with improved HILIC-UHPLC-QqQ-MS/MS and interactive machine learning

Some python code to transcribe DNA to mRNA and translate mRNA to amino acids.

Cluster analysis for side chains in amino-acids. Use of a custom measure needed in R^m×3 to apply cluster analysis methodology. Comparison of several distances for 3- Dimensional structures. Custom matricial similarity measures are proposed. Pioneer approach, quite different from the usual one in the R^p space. Implementation of custom K-means a…

Protein folding with local propensity using GA

A coarse grained circular statistical tool that allows us to estimate the role of local and nonlocal factors in determining both the secondary and tertiary structure of globular proteins.

Protein Digestibility Data

A simple, fast program which transcribes a DNA strand into messenger RNA (mRNA), which it then translates into amino acids, implemented in Rust.

Narrowly, Find sequences including nucleotide(or amino acid) spacers (Broadly, you can find the speific sequences of front and back while ignoring the middle sequences), and Write the result of finding them to csv files.(Language: Python3.9)

MegaVir is a bioinformatic pipeline for virome characterization and genome assembly.

An open-source mnemonic card game for amino acids (aa). It essentially relies on a simplified molecular representation, redundant visual encoding, emphasis, and de-emphasis of molecular parts.

Analysis of selected cytokines and metabolites in the publicly available INCOV cohort

Game in which amino acids do battle, written in C++ using Qt

Detecting single amino acids and small peptides by combining isobaric tags and peptidomics

Easy-to-use biological sequence tools working with DNA, RNA and aminoacid sequences.

Building and optimization of molecular structures using Avogadro software.

Generates all possible sequences of amino acids and saves to a FASTA file. You can edit the min and max length to tell the program what length of sequences is desired.

Pairwise Sequence Aligment Tool (PSAT) a simple application to align sequences.

A set of tools for different calculation of sequences of peptide, dna, rna, etc.