nf-albacore

Nextflow script for nanopore base calling with albacore

Example:

No deplexing

nextflow run thanhleviet/nf-albacore --fast5 "path_to_fast5_folder" --output "output_folder"

Deplexing

nextflow run thanhleviet/nf-albacore --fast5 "path_to_fast5_folder" --output "output_folder" --demultiplex

Name		Name	Last commit message	Last commit date
Latest commit History 5 Commits
README.md		README.md
main.nf		main.nf
nextflow.config		nextflow.config