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Neural network backend for training and inference for animal pose estimation.

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talmolab/sleap-nn

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sleap-nn

Neural network backend for training and inference for animal pose estimation.

Development

  1. Install mamba (mambaforge is a good replacement for miniconda).
  2. Create the environment: With GPU (Windows/Linux):
    mamba env create -f environment.yml
    
    With CPU (Windows/Linux/Intel Mac):
    mamba env create -f environment_cpu.yml
    
    Apple Silicon (M1/M2 Mac):
    mamba env create -f environment_osx-arm64.yml
    
  3. Make sure you can activate the environment:
    mamba activate sleap-nn
    
  4. And run the tests:
    pytest tests
    

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Neural network backend for training and inference for animal pose estimation.

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