Skip to content
@survival-lumc

Survival Analysis Group LUMC

A Github site for projects from the Survival Analysis Group at Leiden University Medical Center (LUMC, the Netherlands).

Pinned

  1. ValidationCompRisks ValidationCompRisks Public

    Code repository for the manuscript 'Validation of the performance of competing risks prediction models: a guide through modern methods' (published in BMJ)

    R 23 10

  2. FrailtyTutorial FrailtyTutorial Public

    R-code and output of all analyses in Balan & Putter (2020): A tutorial in frailty models, Statistical Methods in Medical Research, vol. 29(11), 3424-3454, https://journals.sagepub.com/doi/full/10.1…

    HTML 8

  3. Landmarking2.0 Landmarking2.0 Public

    Code for the paper "Landmarking 2.0: Bridging the gap between joint models and landmarking" by Hein Putter & Hans van Houwelingen

    5

  4. FG-TotalFailureProbability FG-TotalFailureProbability Public

    Code and results of Section 4 of the paper "Fine-Gray subdistribution hazard models to simultaneously estimate the absolute risk of different event types: cumulative total failure probability may e…

    R 4

  5. Validation_Under_Interventions Validation_Under_Interventions Public

    Performance evaluation of predictions under interventions using longitudinal observational data

    R 4

  6. DynamicPrediction-book DynamicPrediction-book Public

    Code and datasets used in book "Dynamic Prediction in Clinical Survival Analysis" by Hans van Houwelingen and Hein Putter (2011)

    R 3

Repositories

Showing 10 of 14 repositories
  • AdvancedSurvival-course Public

    Landing site for 2024 course "Advanced Survival Analysis", given in Leiden (the Netherlands).

    CSS 0 0 0 0 Updated Apr 26, 2024
  • FineGrayDGM Public

    Code accompanying the manuscript "Why you should avoid using multiple Fine–Gray models: insights from (attempts at) simulating proportional subdistribution hazards data" (under review)

    R 1 GPL-3.0 0 0 0 Updated Apr 22, 2024
  • DynamicPrediction-book Public

    Code and datasets used in book "Dynamic Prediction in Clinical Survival Analysis" by Hans van Houwelingen and Hein Putter (2011)

    R 3 0 1 0 Updated Apr 2, 2024
  • AdjCuminc Public

    Performing covariate adjustment on cumulative incidence curves for competing risks data, and comparing various approaches to covariate adjustment via simulation.

    R 1 GPL-3.0 0 0 0 Updated Feb 4, 2024
  • ValidationCompRisks Public

    Code repository for the manuscript 'Validation of the performance of competing risks prediction models: a guide through modern methods' (published in BMJ)

    R 23 GPL-3.0 10 0 0 Updated Feb 1, 2024
  • Validation_Under_Interventions Public

    Performance evaluation of predictions under interventions using longitudinal observational data

    R 4 0 0 0 Updated Nov 13, 2023
  • ImmuneReconstJM Public

    Code and supplementary materials for the manuscript "Joint models quantify associations between T-cell kinetics and allo-immunological events after allogeneic stem cell transplantation and subsequent donor lymphocyte infusion" (2023, Frontiers in Immunology)

    TeX 2 GPL-3.0 0 0 0 Updated Jul 24, 2023
  • ReviewHaemaMissing Public

    Code and supplementary materials for the manuscript "Handling missing covariate data in clinical studies in haematology" (2023, Best Practice & Research Clinical Haematology)

    R 2 GPL-3.0 0 0 0 Updated May 29, 2023
  • CovidPredictimands Public

    Code repository for the paper "The disconnect between development and intended use of clinical prediction models for Covid-19: a systematic review and real-world data illustration"

    R 3 0 0 0 Updated Jun 15, 2022
  • CauseSpecCovarMI Public

    Code and supplementary materials for the manuscript "Multiple imputation for cause-specific Cox models: assessing methods for estimation and prediction" (2022, Statistical Methods in Medical Research)

    R 2 GPL-3.0 0 0 0 Updated Jun 8, 2022
View all repositories

Top languages

Loading…

Most used topics

Loading…