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@PapenfussLab @tidytranscriptomics-workshops
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Pinned

  1. CuratedAtlasQueryR CuratedAtlasQueryR Public

    Tidy R query API for the harmonised and curated CELLxGENE single-cell atlas.

    R 75 6

  2. sccomp sccomp Public

    Testing differences in cell type proportions from single-cell data.

    R 77 5

  3. tidyHeatmap tidyHeatmap Public

    Draw heatmap simply using a tidy data frame

    R 282 21

  4. tidyseurat tidyseurat Public

    Seurat meets tidyverse. The best of both worlds.

    R 143 12

  5. tidybulk tidybulk Public template

    Brings bulk and pseudobulk transcriptomics to the tidyverse

    R 159 23

  6. tidySingleCellExperiment tidySingleCellExperiment Public

    Brings SingleCellExperiment objects to the tidyverse

    R 34 7