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spatstat.linnet

Spatial analysis on a linear network, for the spatstat family

CRAN_Status_Badge GitHub R package version

The original spatstat package has been split into several sub-packages (See spatstat/spatstat).

This package spatstat.linnet is one of the sub-packages. It contains the subset of the functionality of spatstat that deals with data on linear networks.

Overview

spatstat.linnet supports

Network geometry

  • examples of linear networks
  • creation of linear networks from coordinate data
  • extraction of networks from tessellations
  • modification of networks
  • interactive editing of networks
  • geometrical operations and measurement on networks
  • construction of the disc in the shortest-path metric
  • trees, tree branch labels, tree pruning

Point patterns on a network

  • examples of point patterns on linear networks
  • creation of point patterns on a network from coordinate data
  • extraction of sub-patterns
  • shortest-path distance measurement

Covariates on a network

  • create pixel images and functions on a network
  • arithmetic operators for pixel images on a network
  • plot pixel images on a network (colour/thickness/perspective)
  • tessellation on a network

Simulation

  • completely random (uniform Poisson) point patterns on a network
  • nonuniform random (Poisson) point patterns on a network
  • Switzer-type point process
  • log-Gaussian Cox process

Exploratory analysis of point patterns on a network

  • kernel density estimation on a network
  • bandwidth selection
  • kernel smoothing on a network
  • estimation of intensity as a function of a covariate
  • ROC curves
  • Berman-Waller-Lawson test
  • CDF test
  • variable selection by Sufficient Dimension Reduction
  • K function on a network (shortest path or Euclidean distance)
  • pair correlation function on a network (shortest path or Euclidean distance)
  • inhomogeneous K function and pair correlation function
  • inhomogeneous F, G and J functions
  • simulation envelopes of summary functions

Parametric modelling and inference on a network

  • fit point process model on a network
  • fitted/predicted intensity
  • analysis of deviance for point process model
  • simulate fitted model