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Visualization options #2195

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@weaversd weaversd commented Oct 26, 2022

Added options to metaDraw visualization, as well as additional CZE plots, and the ability to filter PSMs for display in the plots.

  • New plot: Histogram of predicted precursor electrophoretic mobility
  • New plot: Predicted Electrophoretic mobility vs observed migration time
  • New option: Option to display the y-axis on a log scale instead of a linear scale.
  • New option: Option to display the histogram bars next to eachother for different samples, as opposed to stacked. This makes sense especially for the log scale option.
  • New options: Option to filter PSMs by Full sequence, which includes PTMs.

weaversd and others added 23 commits September 15, 2022 13:00
@weaversd weaversd added the WIP Work in progress, not ready for review label Oct 26, 2022
@weaversd weaversd assigned weaversd and unassigned weaversd Oct 26, 2022
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weaversd commented Oct 27, 2022

Filtering by Sequence/PTM as an option: This is CZE phosphopeptide enriched bottom-up data from Lianliang Sun. Predicted Electrophoretic Mobility vs. experimental migration time for different subsets of IDd peptides. Filtered in the Visualization tab.
fourPanelPlot mobility vs MT

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codecov bot commented Jan 17, 2023

Codecov Report

Merging #2195 (58c7d13) into master (341d25e) will decrease coverage by 0.15%.
The diff coverage is 60.41%.

Impacted file tree graph

@@            Coverage Diff             @@
##           master    #2195      +/-   ##
==========================================
- Coverage   90.91%   90.77%   -0.15%     
==========================================
  Files         133      133              
  Lines       19999    20090      +91     
  Branches     2772     2782      +10     
==========================================
+ Hits        18183    18236      +53     
- Misses       1311     1343      +32     
- Partials      505      511       +6     
Impacted Files Coverage Δ
EngineLayer/FdrAnalysis/PEPValueAnalysisGeneric.cs 94.73% <0.00%> (-2.17%) ⬇️
GuiFunctions/MetaDraw/PlotModelStat.cs 89.34% <69.56%> (-4.30%) ⬇️
GuiFunctions/MetaDraw/MetaDrawSettings.cs 99.14% <100.00%> (+0.03%) ⬆️
GuiFunctions/MetaDraw/MetaDrawSettingsSnapshot.cs 100.00% <100.00%> (ø)

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