Data and code for the paper:
Merker, S.A and Chandler, R.B. 2021. An experimental test of the Allee effects range limitation hypothesis. Journal of Animal Ecology.
The file JAE-data.gzip contains the data required to run the N-mixture models, including:
- scaled and center covariates of detection
- 3-dimensional array containing counts of Canada warbler (Cardellina canadensis) at 71 point count locations over 4 years
- principal component representing climate gradient derived from PRISM data.
From R, you can load the data with the command load("JAE-data.gzip")
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The JAGS code is in the file Abundance_EN_clim-trt-D.jag. This is just one of models included in the paper.
Merker_Chandler_Appendices.Rmd is an Rmarkdown file for the appendices of the article.