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[python] Fix an ingestion corner-case with empty chunks (#2283) (#2284)
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Co-authored-by: John Kerl <kerl.john.r@gmail.com>
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github-actions[bot] and johnkerl committed Mar 15, 2024
1 parent 29a9904 commit dd06519
Showing 1 changed file with 4 additions and 0 deletions.
4 changes: 4 additions & 0 deletions apis/python/src/tiledbsoma/io/ingest.py
Expand Up @@ -2192,6 +2192,10 @@ def _find_sparse_chunk_size_backed(
if start_index + chunk_size >= extent:
return chunk_size

# The entire chunk is unoccupied sparse; the caller can skip over it
if chunk_nnz == 0:
return chunk_size

# Compare initial estimate chunk nnz against the goal
ratio = chunk_nnz / goal_chunk_nnz

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