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silvtal/README.md

Welcome to my GitHub page!

I'm Silvia, a PhD student at the Autonomous University of Madrid, Spain . I'm currently working on my doctoral thesis on microbial community assembly at Aguirre de Cárcer's lab

🔭 My work includes ...

  • Programming protocols for automating microbial cultures 🌱
  • Analyzing microbial community networks 🕸️
  • Identifying and exploring functional core groups in a community 🔎
  • Studying pangenomes and metabolic modeling 🧪

💻 Things I code with

R Python MATLAB bash Perl

👯 I’m looking to collaborate on ...

  • Software development and benchmarking 👩‍💻
  • Studying microbial assembly 🦠
  • With people all around the world! 🌎

📫 How to reach me

  • 📧 silvia.talavera@uam.es
  • 📍Now on a stay at The University of Tokyo 🇯🇵 (#601 Iwasaki Lab, Bioscience Bldg)
  • 🗣️ You can talk to me in Spanish, English and Japanese. Learning Norwegian and French ☺
️

Welcome to Tokyo!

Above are the last 3 pictures posted by @tokyotokyooldmeetsnew!
Currently, the weather is: °C,
Today, the sun rises at and sets at .

This README file self-updates every 3 hours
Last refresh: Wednesday, 6 September, 18:47 CEST
Here's how it works

Pinned

  1. dilgrowth dilgrowth Public

    This package includes command line scripts and standalone R/c++ functions for simulating growth-dilution experiments. These simulations include neutral drift and optionally functional groups with d…

    R

  2. wordle-jp wordle-jp Public

    Japanese adaptation of Josh Wardle's Wordle

    JavaScript 1

  3. correlation_graphs correlation_graphs Public

    Based on Goyal et al.'s recently published method for inferring statistically significant correlations between OTUs (https://www.biorxiv.org/content/10.1101/2021.01.04.425224v1)

    R 1

  4. SBML_to_graph SBML_to_graph Public

    A few rudimentary functions to generate metabolite graphs from SBML models. Uses ReFramed and one CarveMe function.

    Jupyter Notebook 1

  5. custom_ot2_utils custom_ot2_utils Public

    Opentrons OT2 robot functions or custom labware definitions that we feel other people might find useful

    Python 1

  6. TFM TFM Public

    Este repositorio recoge los scripts desarrollados para automatizar los análisis correspondientes al Trabajo de Fin de Máster "Modelización metabólica de comunidades microbianas estables crecidas co…

    HTML 3