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Update readme
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jtroehr committed May 7, 2019
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12 changes: 6 additions & 6 deletions README.md
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Expand Up @@ -38,20 +38,20 @@ To get the latest version and best performance consider to build Flexbar from so
Make sure that `cmake` is available, as well as development and runtime files of the TBB library 4.0 or later (Intel Threading Building Blocks). For example on Debian systems, install the packages `libtbb-dev` and `libtbb2`. Furthermore, the SeqAn library and a compiler that supports C++14 is required:

* Get SeqAn library version 2.4.0 [here](https://github.com/seqan/seqan/releases/download/seqan-v2.4.0/seqan-library-2.4.0.tar.xz)
* Download Flexbar 3.4.0 source code [release](https://github.com/seqan/flexbar/releases)
* Download Flexbar 3.5.0 source code [release](https://github.com/seqan/flexbar/releases)

Decompress both files:

tar xzf flexbar-3.4.0.tar.gz
tar xzf flexbar-3.5.0.tar.gz
tar xJf seqan-library-2.4.0.tar.xz

Move SeqAn include folder to Flexbar:

mv seqan-library-2.4.0/include flexbar-3.4.0
mv seqan-library-2.4.0/include flexbar-3.5.0

Use these commands for building:

cd flexbar-3.4.0
cd flexbar-3.5.0
cmake .
make

Expand All @@ -65,12 +65,12 @@ For execution of provided Flexbar binaries, the corresponding TBB library has to
#### Linux
Adjust lib search path to include the absolute path of the Flexbar directory containing the lib file libtbb.so.2 for the current terminal session, or permanently in shell startup scripts:

export LD_LIBRARY_PATH=/YourPath/flexbar-3.4.0-linux:$LD_LIBRARY_PATH
export LD_LIBRARY_PATH=/YourPath/flexbar-3.5.0-linux:$LD_LIBRARY_PATH

#### Mac OS
It applies the same as for Linux. Make the file libtbb.dylib available by setting the lib search path:

export DYLD_LIBRARY_PATH=/YourPath/flexbar-3.4.0-macos:$DYLD_LIBRARY_PATH
export DYLD_LIBRARY_PATH=/YourPath/flexbar-3.5.0-macos:$DYLD_LIBRARY_PATH


### Program usage
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