Skip to content

Commit

Permalink
Update after new compilation
Browse files Browse the repository at this point in the history
  • Loading branch information
@sdray
sdray committed Dec 6, 2023
1 parent 0776dbb commit 81be6b0
Show file tree
Hide file tree
Showing 66 changed files with 330 additions and 295 deletions.
44 changes: 28 additions & 16 deletions README.html
View file
Expand Up @@ -604,7 +604,7 @@
<!-- README.md is generated from README.Rmd. Please edit that file -->

<h1 id="lausannebasic">LausanneBasic</h1>
<p><a href="https://mybinder.org/v2/gh/sdray/LausanneBasic/main?urlpath=rstudio"><img src="data:image/svg+xml;base64,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" alt="Binder" /></a></p>
<p><a href="https://mybinder.org/v2/gh/sdray/LausanneBasic/main?urlpath=rstudio"><img src="https://mybinder.org/badge_logo.svg" alt="Binder" /></a></p>
<p>This repository contains the material for the course <em>Training in
ade4 in R - Module I: Basic methods</em>.</p>
<h2 id="contents">Contents</h2>
Expand Down Expand Up @@ -672,7 +672,7 @@ <h3 id="how-to-cite">How to cite</h3>
<p>Please cite this document as:</p>
<blockquote>
<p>Dray, S. (2023). Training in ade4 in R - Module I: Basic methods .
Accessed 03 déc. 2023. Online at <a href="https://github.com/sdray/LausanneBasic/">https://github.com/sdray/LausanneBasic/</a></p>
Accessed 06 déc. 2023. Online at <a href="https://github.com/sdray/LausanneBasic/">https://github.com/sdray/LausanneBasic/</a></p>
</blockquote>
<h3 id="licenses">Licenses</h3>
<p><strong>Text and figures :</strong> <a href="http://creativecommons.org/licenses/by/4.0/">CC-BY-4.0</a></p>
Expand All @@ -693,20 +693,32 @@ <h3 id="session-information">Session Information</h3>
<span id="cb1-8"><a href="#cb1-8" aria-hidden="true" tabindex="-1"></a><span class="co">#&gt; LAPACK: /usr/lib/x86_64-linux-gnu/atlas/liblapack.so.3.10.3</span></span>
<span id="cb1-9"><a href="#cb1-9" aria-hidden="true" tabindex="-1"></a><span class="co">#&gt; </span></span>
<span id="cb1-10"><a href="#cb1-10" aria-hidden="true" tabindex="-1"></a><span class="co">#&gt; locale:</span></span>
<span id="cb1-11"><a href="#cb1-11" aria-hidden="true" tabindex="-1"></a><span class="co">#&gt; [1] LC_CTYPE=fr_FR.UTF-8 LC_NUMERIC=C LC_TIME=fr_FR.UTF-8 LC_COLLATE=fr_FR.UTF-8 LC_MONETARY=fr_FR.UTF-8 LC_MESSAGES=fr_FR.UTF-8 </span></span>
<span id="cb1-12"><a href="#cb1-12" aria-hidden="true" tabindex="-1"></a><span class="co">#&gt; [7] LC_PAPER=fr_FR.UTF-8 LC_NAME=C LC_ADDRESS=C LC_TELEPHONE=C LC_MEASUREMENT=fr_FR.UTF-8 LC_IDENTIFICATION=C </span></span>
<span id="cb1-13"><a href="#cb1-13" aria-hidden="true" tabindex="-1"></a><span class="co">#&gt; </span></span>
<span id="cb1-14"><a href="#cb1-14" aria-hidden="true" tabindex="-1"></a><span class="co">#&gt; attached base packages:</span></span>
<span id="cb1-15"><a href="#cb1-15" aria-hidden="true" tabindex="-1"></a><span class="co">#&gt; [1] stats graphics grDevices utils datasets methods base </span></span>
<span id="cb1-16"><a href="#cb1-16" aria-hidden="true" tabindex="-1"></a><span class="co">#&gt; </span></span>
<span id="cb1-17"><a href="#cb1-17" aria-hidden="true" tabindex="-1"></a><span class="co">#&gt; loaded via a namespace (and not attached):</span></span>
<span id="cb1-18"><a href="#cb1-18" aria-hidden="true" tabindex="-1"></a><span class="co">#&gt; [1] Rcpp_1.0.10 pillar_1.8.1 compiler_4.2.1 later_1.3.0 urlchecker_1.0.1 prettyunits_1.1.1 profvis_0.3.7 remotes_2.4.2 tools_4.2.1 </span></span>
<span id="cb1-19"><a href="#cb1-19" aria-hidden="true" tabindex="-1"></a><span class="co">#&gt; [10] digest_0.6.29 pkgbuild_1.3.1 pkgload_1.3.0 tibble_3.1.8 memoise_2.0.1 evaluate_0.17 lifecycle_1.0.3 pkgconfig_2.0.3 rlang_1.0.6 </span></span>
<span id="cb1-20"><a href="#cb1-20" aria-hidden="true" tabindex="-1"></a><span class="co">#&gt; [19] shiny_1.7.2 cli_3.4.1 rstudioapi_0.14 yaml_2.3.5 pagedown_0.19 xfun_0.33 fastmap_1.1.0 knitr_1.40 stringr_1.4.1 </span></span>
<span id="cb1-21"><a href="#cb1-21" aria-hidden="true" tabindex="-1"></a><span class="co">#&gt; [28] vctrs_0.4.2 fs_1.5.2 htmlwidgets_1.5.4 devtools_2.4.5 rprojroot_2.0.3 here_1.0.1 glue_1.6.2 R6_2.5.1 processx_3.7.0 </span></span>
<span id="cb1-22"><a href="#cb1-22" aria-hidden="true" tabindex="-1"></a><span class="co">#&gt; [37] fansi_1.0.3 rmarkdown_2.17 sessioninfo_1.2.2 callr_3.7.3 purrr_0.3.5 magrittr_2.0.3 ps_1.7.1 promises_1.2.0.1 ellipsis_0.3.2 </span></span>
<span id="cb1-23"><a href="#cb1-23" aria-hidden="true" tabindex="-1"></a><span class="co">#&gt; [46] htmltools_0.5.3 usethis_2.1.6 mime_0.12 xtable_1.8-4 httpuv_1.6.6 utf8_1.2.2 stringi_1.7.8 miniUI_0.1.1.1 cachem_1.0.6 </span></span>
<span id="cb1-24"><a href="#cb1-24" aria-hidden="true" tabindex="-1"></a><span class="co">#&gt; [55] crayon_1.5.2</span></span></code></pre></div>
<span id="cb1-11"><a href="#cb1-11" aria-hidden="true" tabindex="-1"></a><span class="co">#&gt; [1] LC_CTYPE=fr_FR.UTF-8 LC_NUMERIC=C LC_TIME=fr_FR.UTF-8 </span></span>
<span id="cb1-12"><a href="#cb1-12" aria-hidden="true" tabindex="-1"></a><span class="co">#&gt; [4] LC_COLLATE=fr_FR.UTF-8 LC_MONETARY=fr_FR.UTF-8 LC_MESSAGES=fr_FR.UTF-8 </span></span>
<span id="cb1-13"><a href="#cb1-13" aria-hidden="true" tabindex="-1"></a><span class="co">#&gt; [7] LC_PAPER=fr_FR.UTF-8 LC_NAME=C LC_ADDRESS=C </span></span>
<span id="cb1-14"><a href="#cb1-14" aria-hidden="true" tabindex="-1"></a><span class="co">#&gt; [10] LC_TELEPHONE=C LC_MEASUREMENT=fr_FR.UTF-8 LC_IDENTIFICATION=C </span></span>
<span id="cb1-15"><a href="#cb1-15" aria-hidden="true" tabindex="-1"></a><span class="co">#&gt; </span></span>
<span id="cb1-16"><a href="#cb1-16" aria-hidden="true" tabindex="-1"></a><span class="co">#&gt; attached base packages:</span></span>
<span id="cb1-17"><a href="#cb1-17" aria-hidden="true" tabindex="-1"></a><span class="co">#&gt; [1] stats graphics grDevices utils datasets methods base </span></span>
<span id="cb1-18"><a href="#cb1-18" aria-hidden="true" tabindex="-1"></a><span class="co">#&gt; </span></span>
<span id="cb1-19"><a href="#cb1-19" aria-hidden="true" tabindex="-1"></a><span class="co">#&gt; other attached packages:</span></span>
<span id="cb1-20"><a href="#cb1-20" aria-hidden="true" tabindex="-1"></a><span class="co">#&gt; [1] ade4_1.7-22</span></span>
<span id="cb1-21"><a href="#cb1-21" aria-hidden="true" tabindex="-1"></a><span class="co">#&gt; </span></span>
<span id="cb1-22"><a href="#cb1-22" aria-hidden="true" tabindex="-1"></a><span class="co">#&gt; loaded via a namespace (and not attached):</span></span>
<span id="cb1-23"><a href="#cb1-23" aria-hidden="true" tabindex="-1"></a><span class="co">#&gt; [1] Rcpp_1.0.10 pillar_1.8.1 compiler_4.2.1 later_1.3.0 </span></span>
<span id="cb1-24"><a href="#cb1-24" aria-hidden="true" tabindex="-1"></a><span class="co">#&gt; [5] urlchecker_1.0.1 prettyunits_1.1.1 profvis_0.3.7 remotes_2.4.2 </span></span>
<span id="cb1-25"><a href="#cb1-25" aria-hidden="true" tabindex="-1"></a><span class="co">#&gt; [9] tools_4.2.1 digest_0.6.29 pkgbuild_1.3.1 pkgload_1.3.0 </span></span>
<span id="cb1-26"><a href="#cb1-26" aria-hidden="true" tabindex="-1"></a><span class="co">#&gt; [13] tibble_3.1.8 memoise_2.0.1 evaluate_0.17 lifecycle_1.0.3 </span></span>
<span id="cb1-27"><a href="#cb1-27" aria-hidden="true" tabindex="-1"></a><span class="co">#&gt; [17] pkgconfig_2.0.3 rlang_1.0.6 shiny_1.7.2 cli_3.4.1 </span></span>
<span id="cb1-28"><a href="#cb1-28" aria-hidden="true" tabindex="-1"></a><span class="co">#&gt; [21] rstudioapi_0.14 yaml_2.3.5 pagedown_0.19 xfun_0.33 </span></span>
<span id="cb1-29"><a href="#cb1-29" aria-hidden="true" tabindex="-1"></a><span class="co">#&gt; [25] fastmap_1.1.0 knitr_1.40 stringr_1.4.1 vctrs_0.4.2 </span></span>
<span id="cb1-30"><a href="#cb1-30" aria-hidden="true" tabindex="-1"></a><span class="co">#&gt; [29] fs_1.5.2 htmlwidgets_1.5.4 devtools_2.4.5 rprojroot_2.0.3 </span></span>
<span id="cb1-31"><a href="#cb1-31" aria-hidden="true" tabindex="-1"></a><span class="co">#&gt; [33] here_1.0.1 glue_1.6.2 R6_2.5.1 processx_3.7.0 </span></span>
<span id="cb1-32"><a href="#cb1-32" aria-hidden="true" tabindex="-1"></a><span class="co">#&gt; [37] fansi_1.0.3 rmarkdown_2.17 sessioninfo_1.2.2 callr_3.7.3 </span></span>
<span id="cb1-33"><a href="#cb1-33" aria-hidden="true" tabindex="-1"></a><span class="co">#&gt; [41] purrr_0.3.5 magrittr_2.0.3 MASS_7.3-57 ps_1.7.1 </span></span>
<span id="cb1-34"><a href="#cb1-34" aria-hidden="true" tabindex="-1"></a><span class="co">#&gt; [45] promises_1.2.0.1 ellipsis_0.3.2 htmltools_0.5.3 usethis_2.1.6 </span></span>
<span id="cb1-35"><a href="#cb1-35" aria-hidden="true" tabindex="-1"></a><span class="co">#&gt; [49] mime_0.12 xtable_1.8-4 httpuv_1.6.6 utf8_1.2.2 </span></span>
<span id="cb1-36"><a href="#cb1-36" aria-hidden="true" tabindex="-1"></a><span class="co">#&gt; [53] stringi_1.7.8 miniUI_0.1.1.1 cachem_1.0.6 crayon_1.5.2</span></span></code></pre></div>

</body>
</html>
32 changes: 22 additions & 10 deletions README.md
View file
Expand Up @@ -83,7 +83,7 @@ An alternative is to use the following code in your R session:
Please cite this document as:

> Dray, S. (2023). Training in ade4 in R - Module I: Basic methods .
> Accessed 03 déc. 2023. Online at
> Accessed 06 déc. 2023. Online at
> <https://github.com/sdray/LausanneBasic/>
### Licenses
Expand Down Expand Up @@ -113,18 +113,30 @@ utils::sessionInfo()
#> LAPACK: /usr/lib/x86_64-linux-gnu/atlas/liblapack.so.3.10.3
#>
#> locale:
#> [1] LC_CTYPE=fr_FR.UTF-8 LC_NUMERIC=C LC_TIME=fr_FR.UTF-8 LC_COLLATE=fr_FR.UTF-8 LC_MONETARY=fr_FR.UTF-8 LC_MESSAGES=fr_FR.UTF-8
#> [7] LC_PAPER=fr_FR.UTF-8 LC_NAME=C LC_ADDRESS=C LC_TELEPHONE=C LC_MEASUREMENT=fr_FR.UTF-8 LC_IDENTIFICATION=C
#> [1] LC_CTYPE=fr_FR.UTF-8 LC_NUMERIC=C LC_TIME=fr_FR.UTF-8
#> [4] LC_COLLATE=fr_FR.UTF-8 LC_MONETARY=fr_FR.UTF-8 LC_MESSAGES=fr_FR.UTF-8
#> [7] LC_PAPER=fr_FR.UTF-8 LC_NAME=C LC_ADDRESS=C
#> [10] LC_TELEPHONE=C LC_MEASUREMENT=fr_FR.UTF-8 LC_IDENTIFICATION=C
#>
#> attached base packages:
#> [1] stats graphics grDevices utils datasets methods base
#>
#> other attached packages:
#> [1] ade4_1.7-22
#>
#> loaded via a namespace (and not attached):
#> [1] Rcpp_1.0.10 pillar_1.8.1 compiler_4.2.1 later_1.3.0 urlchecker_1.0.1 prettyunits_1.1.1 profvis_0.3.7 remotes_2.4.2 tools_4.2.1
#> [10] digest_0.6.29 pkgbuild_1.3.1 pkgload_1.3.0 tibble_3.1.8 memoise_2.0.1 evaluate_0.17 lifecycle_1.0.3 pkgconfig_2.0.3 rlang_1.0.6
#> [19] shiny_1.7.2 cli_3.4.1 rstudioapi_0.14 yaml_2.3.5 pagedown_0.19 xfun_0.33 fastmap_1.1.0 knitr_1.40 stringr_1.4.1
#> [28] vctrs_0.4.2 fs_1.5.2 htmlwidgets_1.5.4 devtools_2.4.5 rprojroot_2.0.3 here_1.0.1 glue_1.6.2 R6_2.5.1 processx_3.7.0
#> [37] fansi_1.0.3 rmarkdown_2.17 sessioninfo_1.2.2 callr_3.7.3 purrr_0.3.5 magrittr_2.0.3 ps_1.7.1 promises_1.2.0.1 ellipsis_0.3.2
#> [46] htmltools_0.5.3 usethis_2.1.6 mime_0.12 xtable_1.8-4 httpuv_1.6.6 utf8_1.2.2 stringi_1.7.8 miniUI_0.1.1.1 cachem_1.0.6
#> [55] crayon_1.5.2
#> [1] Rcpp_1.0.10 pillar_1.8.1 compiler_4.2.1 later_1.3.0
#> [5] urlchecker_1.0.1 prettyunits_1.1.1 profvis_0.3.7 remotes_2.4.2
#> [9] tools_4.2.1 digest_0.6.29 pkgbuild_1.3.1 pkgload_1.3.0
#> [13] tibble_3.1.8 memoise_2.0.1 evaluate_0.17 lifecycle_1.0.3
#> [17] pkgconfig_2.0.3 rlang_1.0.6 shiny_1.7.2 cli_3.4.1
#> [21] rstudioapi_0.14 yaml_2.3.5 pagedown_0.19 xfun_0.33
#> [25] fastmap_1.1.0 knitr_1.40 stringr_1.4.1 vctrs_0.4.2
#> [29] fs_1.5.2 htmlwidgets_1.5.4 devtools_2.4.5 rprojroot_2.0.3
#> [33] here_1.0.1 glue_1.6.2 R6_2.5.1 processx_3.7.0
#> [37] fansi_1.0.3 rmarkdown_2.17 sessioninfo_1.2.2 callr_3.7.3
#> [41] purrr_0.3.5 magrittr_2.0.3 MASS_7.3-57 ps_1.7.1
#> [45] promises_1.2.0.1 ellipsis_0.3.2 htmltools_0.5.3 usethis_2.1.6
#> [49] mime_0.12 xtable_1.8-4 httpuv_1.6.6 utf8_1.2.2
#> [53] stringi_1.7.8 miniUI_0.1.1.1 cachem_1.0.6 crayon_1.5.2
```
9 changes: 5 additions & 4 deletions course/session1/session1.html
View file
Expand Up @@ -4,7 +4,7 @@
<title>Training in ade4 in R - Module I: Basic methods</title>
<meta charset="utf-8" />
<meta name="author" content="Stéphane Dray" />
<meta name="date" content="2023-12-03" />
<meta name="date" content="2023-12-06" />
<script src="libs/header-attrs/header-attrs.js"></script>
<link rel="stylesheet" href="custom.css" type="text/css" />
<link rel="stylesheet" href="xaringan-themer.css" type="text/css" />
Expand All @@ -23,7 +23,7 @@
### Stéphane Dray
]
.date[
### 2023-12-03
### 2023-12-06
]

---
Expand Down Expand Up @@ -346,8 +346,9 @@
```

```
## [1] "dudi.acm" "dudi.coa" "dudi.dec" "dudi.fca" "dudi.fpca" "dudi.hillsmith" "dudi.mix" "dudi.nsc" "dudi.pca" "dudi.pco"
## [11] "dudi.type"
## [1] "dudi.acm" "dudi.coa" "dudi.dec" "dudi.fca"
## [5] "dudi.fpca" "dudi.hillsmith" "dudi.mix" "dudi.nsc"
## [9] "dudi.pca" "dudi.pco" "dudi.type"
```
---
# Available methods
Expand Down
Binary file modified course/session1/session1.pdf
View file
Binary file not shown.
2 changes: 1 addition & 1 deletion course/session2/fig/unnamed-chunk-11-1.svg
View file
Sorry, something went wrong. Reload?
Sorry, we cannot display this file.
Sorry, this file is invalid so it cannot be displayed.
2 changes: 1 addition & 1 deletion course/session2/fig/unnamed-chunk-12-1.svg
View file
Sorry, something went wrong. Reload?
Sorry, we cannot display this file.
Sorry, this file is invalid so it cannot be displayed.
2 changes: 1 addition & 1 deletion course/session2/fig/unnamed-chunk-13-1.svg
View file
Sorry, something went wrong. Reload?
Sorry, we cannot display this file.
Sorry, this file is invalid so it cannot be displayed.
2 changes: 1 addition & 1 deletion course/session2/fig/unnamed-chunk-14-1.svg
View file
Sorry, something went wrong. Reload?
Sorry, we cannot display this file.
Sorry, this file is invalid so it cannot be displayed.

0 comments on commit 81be6b0

Please sign in to comment.