Skip to content

Pull requests: scverse/scanpy

New pull request New
65 Open 1,276 Closed
65 Open 1,276 Closed
Author
Filter by author
Label
Filter by label
Use alt + click/return to exclude labels
or ⇧ + click/return for logical OR
Projects
Filter by project
Milestones
Filter by milestone
Reviews
Filter by reviews
No reviews Review required Approved review Changes requested
Assignee
Filter by who’s assigned
Sort
Sort by
Newest Oldest Most commented Least commented Recently updated Least recently updated Best match
Most reactions
👍 👎 😄 🎉 😕 ❤️ 🚀 👀

Pull requests list

(feat): raising errors where backed is not supported
Area - Documentation 📒 Area - Out of core 💾 Working with on disk data Area – API API design
#3048 opened May 8, 2024 by ilan-gold • Draft
3 tasks
1.10.2
2
@ilan-gold
1
Fix import of issparse
Development Process 🚀
#3047 opened May 7, 2024 by flying-sheep Loading… 1.10.2
2
Backport PR #3045 on branch 1.10.x ([pre-commit.ci] pre-commit autoupdate)
#3046 opened May 7, 2024 by meeseeksmachine Loading… 1.10.2
1
Speedup scrublet
Area – Performance 🐌 benchmark
#3044 opened May 6, 2024 by Intron7 Loading…
5
✨ Add colorblocks to baseplot similar to heatmap
Area - Plotting 🌺
#3043 opened May 2, 2024 by mbuttner Loading…
2 tasks done
1
hvg flavors seurat and cellranger with batch: bug in subset
#3042 opened May 2, 2024 by eroell • Draft
2 of 3 tasks
1
2
Use modern RNG
benchmark
#3041 opened Apr 30, 2024 by flying-sheep Loading…
1 of 3 tasks
1.10.2
1
@flying-sheep
6
Extend benchmarks from basic tutorial
benchmark Development Process 🚀
#3031 opened Apr 26, 2024 by flying-sheep Loading…
2 of 3 tasks
1.10.2
1
@flying-sheep
6
Hvg seurat v3 multicore kernel
Area – Performance 🐌 benchmark
#3017 opened Apr 22, 2024 by Intron7 Loading… 1.10.2
1
6
Start overhaul for embedding sort order
Area - Plotting 🌺 Enhancement ✨
#2998 opened Apr 10, 2024 by ivirshup • Draft
20 tasks
1.11.0
1
1
parquet support for visium HD
#2992 opened Apr 9, 2024 by ktpolanski Loading…
1 of 3 tasks
1
2
Pearson Residuals: normalization and hvg
#2980 opened Apr 5, 2024 by eroell • Draft
2 of 3 tasks
1
13
(chore): run azure on multiple vm images
#2976 opened Apr 3, 2024 by ilan-gold • Draft
3 tasks
4
DensMAP support 2
#2946 opened Mar 22, 2024 by keller-mark Loading…
3 of 4 tasks
1
1
Add layer argument to score_genes()
#2921 opened Mar 15, 2024 by lazappi Loading…
2 of 3 tasks
1.11.0
1
7
Updated missing params in docstrings
#2888 opened Feb 23, 2024 by Steve-Cheney Loading…
2 tasks done
5
Bugfix: Gene score edge case where gene_list gene is chosen as control gene
#2875 opened Feb 21, 2024 by mumichae Loading…
2 of 3 tasks
1.10.2
1
@flying-sheep
19
Stacked barplot
#2873 opened Feb 20, 2024 by mbernste Loading…
1
tSNE components parameter
#2803 opened Jan 11, 2024 by ch1ru Loading…
2 of 3 tasks
1
1
Faster filtering on sparse matrices
#2772 opened Nov 30, 2023 by gjhuizing Loading…
3 tasks
5
Generalize tl.dendrogram function to either axis
#2771 opened Nov 28, 2023 by dburkhardt Loading…
2 of 3 tasks
1.11.0
1
@flying-sheep
14
obs. vs. obs for all grouped plots using BasePlot
#2769 opened Nov 28, 2023 by yugeji Loading…
1 of 6 tasks
1.11.0
@flying-sheep
2
Added intercept to regress_out()
#2731 opened Nov 6, 2023 by ggit12 Loading…
1 of 3 tasks
1.11.0
6
Add deprecated_func decorator
#2714 opened Oct 25, 2023 by glitchheadgit Loading…
3 tasks done
1
3
DensMAP support
#2684 opened Oct 14, 2023 by AlePur Loading…
2
ProTip! no:milestone will show everything without a milestone.