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FEA add TunedThresholdClassifier meta-estimator to post-tune the cut-off threshold #26120

Merged
merged 228 commits into from May 3, 2024
Merged

FEA add TunedThresholdClassifier meta-estimator to post-tune the cut-off threshold #26120

merged 228 commits into from May 3, 2024
+2,850 −36

Commits on Mar 31, 2023

  1. MAINT refactor scorer using _get_response_values

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Commits on Apr 1, 2023

  1. Add __name__ for method of Mock

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  2. remove multiclass issue

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Commits on Apr 3, 2023

  1. make response_method a mandatory arg

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  2. Update sklearn/metrics/_scorer.py 

    Co-authored-by: Jérémie du Boisberranger <34657725+jeremiedbb@users.noreply.github.com>
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  3. apply jeremie comments

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  4. Merge branch 'main' into is/18589_restart

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Commits on Apr 4, 2023

  1. Merge remote-tracking branch 'origin/main' into cutoff_classifier_again

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  2. iter

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  3. Merge remote-tracking branch 'glemaitre/is/18589_restart' into cutoff… 

    …_classifier_again
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Commits on Apr 7, 2023

  1. FEA add CutOffClassifier to post-tune prediction threshold

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  2. DOC add changelog entry

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  3. refresh implementation

    @glemaitre
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  4. add files

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  5. remove random state for the moment

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Commits on Apr 15, 2023

  1. TST make sure to pass the common test

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  2. TST metaestimator sample_weight

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  3. API add prediction functions

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Commits on Apr 17, 2023

  1. TST bypass the test for classification

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  2. iter before another bug

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Commits on Apr 18, 2023

  1. iter

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Commits on Apr 19, 2023

  1. TST add test for _fit_and_score

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  2. iter

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  3. integrate refit

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  4. TST more test

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  5. TST more test with sample_weight

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  6. BUG fit_params split

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  7. TST add test for fit_params

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Commits on Apr 20, 2023

  1. TST check underlying response method for TNR/TPR

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  2. FEA add the possibility to provide a dict

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  3. TST check string and pos_label interation for cost-matrix

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  4. TST add sample_weight test for cost-matrix

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  5. iter

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Commits on Apr 24, 2023

  1. Merge remote-tracking branch 'origin/main' into cutoff_classifier_again

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  2. change strategy for finding max

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  3. iter

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  4. add some test for precision-recall

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  5. TST add invariance zeros weight

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  6. DOC fix default n_thresholds

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Commits on Apr 25, 2023

  1. DOC add a small example

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  2. iter

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  3. iter

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  4. bug fixes everywhere

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  5. iter

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Commits on Apr 26, 2023

  1. Do not allow for single threshold

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  2. TST add random state checkingclassifier

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  3. TST more test for _ContinuousScorer

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  4. TST add test for pos_label

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  5. TST add pos_label test for TNR/TPR

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  6. some more

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Commits on Apr 27, 2023

  1. avoid extrapolation

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  2. FEA add all thresholds and score computed as attributes

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Commits on Apr 28, 2023

  1. fix docstring

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  2. EXA add example of cut-off tuning

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  3. Merge remote-tracking branch 'origin/main' into cutoff_classifier_again

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  4. solving the issue of unknown categories

    @glemaitre
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  5. fix

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Commits on Apr 29, 2023

  1. EXA add hyperlink in the example

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  2. DOC add warning regarding overfitting

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  3. some more doc

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  4. some more doc

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Commits on May 2, 2023

  1. DOC more documentation

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  2. Merge remote-tracking branch 'origin/main' into cutoff_classifier_again

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  3. fix import

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  4. fix import

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  5. iter

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  6. fix

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Commits on May 4, 2023

  1. Merge remote-tracking branch 'origin/main' into cutoff_classifier_again

    @glemaitre
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  2. Update sklearn/metrics/_scorer.py 

    Co-authored-by: Christian Lorentzen <lorentzen.ch@gmail.com>
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Commits on May 15, 2023

  1. Apply suggestions from code review 

    Co-authored-by: Arturo Amor <86408019+ArturoAmorQ@users.noreply.github.com>
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Commits on Jun 1, 2023

  1. Fix linter

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  2. Merge branch 'main' into cutoff_classifier_again

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Commits on Jun 7, 2023

  1. Add routing to LogisticRegressionCV

    Omar Salman committed Jun 7, 2023
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  2. Add a test with enable_metadata_routing=False and fix an issue in sco… 

    …re method
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Commits on Jun 13, 2023

  1. Add metaestimator tests and fix passing routed params in score method

    Omar Salman committed Jun 13, 2023
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Commits on Jun 25, 2023

  1. PR suggestions

    Omar Salman committed Jun 25, 2023
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Commits on Jun 26, 2023

  1. Merge branch 'main' into logistic_cv_routing

    Omar Salman committed Jun 26, 2023
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  2. Add changelog entry

    Omar Salman committed Jun 26, 2023
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  3. Add user and pr information

    Omar Salman committed Jun 26, 2023
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  4. Changelog adjustment

    Omar Salman committed Jun 26, 2023
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  5. Remove repr method from ConsumingScorer

    Omar Salman committed Jun 26, 2023
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Commits on Jul 3, 2023

  1. Merge remote-tracking branch 'origin/main' into cutoff_classifier_again

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  2. handle the np.inf case in roc-curve

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Commits on Jul 7, 2023

  1. Merge branch 'main' into logistic_cv_routing

    @adrinjalali
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  2. Adjust changelog

    Omar Salman committed Jul 7, 2023
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Commits on Jul 10, 2023

  1. Add tests for error when passing params when routing not enabled in L… 

    …ogisticRegressionCV
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Commits on Jul 13, 2023

  1. Address PR suggestions partially

    Omar Salman committed Jul 13, 2023
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  2. address comment Tim

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  3. iter

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  4. Merge remote-tracking branch 'origin/main' into cutoff_classifier_again

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  5. MAINT rename modules as per olivier comment

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  6. add missing module

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  7. update changelog

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  8. more renaming

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  9. iter

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  10. Adjust and change the name of params in _check_method_params

    @OmarManzoor
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  11. Resolve conflict in changelog

    @OmarManzoor
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  12. iter

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  13. iter

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  14. iter

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  15. iter

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  16. iter

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  17. Merge branch 'main' into logistic_cv_routing

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  18. iter

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  19. Merge remote-tracking branch 'origin/main' into cutoff_classifier_again

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  20. Merge branch 'pr/OmarManzoor/26525' into cutoff_with_metadata_routing

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Commits on Jul 14, 2023

  1. Merge remote-tracking branch 'origin/main' into cutoff_with_metadata_… 

    …routing
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  2. Add metadata routing

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  3. Apply suggestions from code review 

    Co-authored-by: Soledad Galli <solegalli@protonmail.com>
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  4. CLN clean up some repeated code related to SLEP006

    @adrinjalali @glemaitre
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  5. iter

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  6. iter

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Commits on Jul 15, 2023

  1. ENH add new response_method in make_scorer

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  2. add non-regression test

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  3. update validation param

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  4. more coverage

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  5. TST add mulitlabel test

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  6. Merge branch 'make_scorer_list_response' into cutoff_classifier_again

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  7. simplify scorer

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  8. iter

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  9. remove unecessary part in doc

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  10. iter

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Commits on Jul 16, 2023

  1. iter

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Commits on Jul 24, 2023

  1. address tim comments

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  2. Merge remote-tracking branch 'origin/main' into make_scorer_list_resp… 

    …onse
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  3. Merge remote-tracking branch 'origin/main' into cutoff_classifier_again

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  4. Merge branch 'make_scorer_list_response' into cutoff_classifier_again

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Commits on Jul 26, 2023

  1. iter

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  2. iter

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Commits on Jul 28, 2023

  1. iter

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  2. iter

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  3. Merge remote-tracking branch 'origin/main' into cutoff_classifier_again

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  4. iter

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Commits on Jul 30, 2023

  1. iter

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Commits on Aug 7, 2023

  1. Merge remote-tracking branch 'origin/main' into cutoff_classifier_again

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Commits on Aug 11, 2023

  1. Merge remote-tracking branch 'origin/main' into cutoff_classifier_again

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Commits on Sep 28, 2023

  1. Merge remote-tracking branch 'origin/main' into cutoff_classifier_again

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Commits on Oct 17, 2023

  1. Merge remote-tracking branch 'origin/main' into cutoff_classifier_again

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  2. solve deprecation

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  3. Merge remote-tracking branch 'glemaitre/cutoff_classifier_again' into… 

    … cutoff_classifier_again
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  4. update changelog

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  5. whoops

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  6. Update sklearn/metrics/_scorer.py

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  7. fix doc

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Commits on Oct 18, 2023

  1. remove useless fitted attributes

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Commits on Dec 4, 2023

  1. Merge branch 'main' into cutoff_classifier_again

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  2. bump pandas to 1.1.5

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  3. update lock file

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Commits on Jan 13, 2024

  1. iter

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  2. update doc-min lock file

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  3. partial reviews

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Commits on Mar 18, 2024

  1. Merge remote-tracking branch 'origin/main' into cutoff_classifier_again

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  2. Apply suggestions from code review 

    Co-authored-by: Andreas Mueller <t3kcit@gmail.com>
Co-authored-by: Olivier Grisel <olivier.grisel@ensta.org>
Co-authored-by: Thomas J. Fan <thomasjpfan@gmail.com>
Co-authored-by: Joel Nothman <joeln@canva.com>
    @glemaitre @amueller
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    5 people committed Mar 18, 2024
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  3. update lock files

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  4. Merge remote-tracking branch 'glemaitre/cutoff_classifier_again' into… 

    … cutoff_classifier_again
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  5. iter

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Commits on Mar 19, 2024

  1. simplify refit and do not allow cv == 1

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  2. Merge remote-tracking branch 'origin/main' into cutoff_classifier_again

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  3. check raise for multilabel

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  4. fix test name

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  5. test another to check if beta is forwarded

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Commits on Mar 20, 2024

  1. iter

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  2. refit=True and cv is float

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Commits on Mar 22, 2024

  1. rename scorer to curve scorer internally

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  2. add a note regarding the abuse of the scorer API

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  3. use None instead of highest

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Commits on Mar 23, 2024

  1. use a closer CV API

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  2. fix example

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  3. simplify model

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  4. fix

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  5. fix docstring

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Commits on Mar 30, 2024

  1. Apply suggestions from code review 

    Co-authored-by: Olivier Grisel <olivier.grisel@ensta.org>
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Commits on Apr 2, 2024

  1. Apply suggestions from code review 

    Co-authored-by: Christian Lorentzen <lorentzen.ch@gmail.com>
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  2. pep8

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  3. rephrase suggestions

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Commits on Apr 4, 2024

  1. Merge remote-tracking branch 'origin/main' into cutoff_classifier_again

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Commits on Apr 8, 2024

  1. fix

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  2. Merge remote-tracking branch 'origin/main' into cutoff_classifier_again

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  3. include and discuss more about amount

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  4. iter

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Commits on Apr 25, 2024

  1. Apply suggestions from code review 

    Co-authored-by: Jérémie du Boisberranger <jeremie@probabl.ai>
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    glemaitre and jeremiedbb committed Apr 25, 2024
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  2. Update examples/model_selection/plot_tuned_decision_threshold.py 

    Co-authored-by: Jérémie du Boisberranger <jeremie@probabl.ai>
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    glemaitre and jeremiedbb committed Apr 25, 2024
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  3. iter

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  4. iter

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  5. other comment

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  6. addressed comments

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Commits on Apr 27, 2024

  1. Apply suggestions from code review 

    Co-authored-by: Jérémie du Boisberranger <jeremie@probabl.ai>
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  2. rename TunedThresholdClassifier to TunedThresholdClassifierCV

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  3. use meaningful values for check the thresholds values depending on po… 

    …s_label
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  4. TST add more info regarding why not exactly 0 and 1

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  5. DOC add documentation for base scorer

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  6. DOC add more details regarding the curve scorer

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  7. directly test curve_scorer instead to look for function anem

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  8. add required arguments

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  9. DOC add docstring for interpolated score

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Commits on Apr 29, 2024

  1. Update sklearn/model_selection/tests/test_classification_threshold.py 

    Co-authored-by: Jérémie du Boisberranger <jeremie@probabl.ai>
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    glemaitre and jeremiedbb committed Apr 29, 2024
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  2. Update sklearn/model_selection/tests/test_classification_threshold.py 

    Co-authored-by: Jérémie du Boisberranger <jeremie@probabl.ai>
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    glemaitre and jeremiedbb committed Apr 29, 2024
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  3. Apply suggestions from code review 

    Co-authored-by: Jérémie du Boisberranger <jeremie@probabl.ai>
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  4. remove duplicated check

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  5. remove duplicated check

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  6. check cv_results_ API

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  7. clone classifier

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  8. TST better comments

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  9. iter

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Commits on Apr 30, 2024

  1. FEA add a ConstantThresholdClassifier instead of strategy="constant" (#… 

    …16)
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  2. make FixedThresholdClassifier appear in example

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  3. iter

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  4. Update doc/modules/classes.rst 

    Co-authored-by: Jérémie du Boisberranger <jeremie@probabl.ai>
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  5. Update sklearn/model_selection/_classification_threshold.py 

    Co-authored-by: Adrin Jalali <adrin.jalali@gmail.com>
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    glemaitre and adrinjalali committed Apr 30, 2024
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  6. TST and fix default parameter

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  7. Merge remote-tracking branch 'origin/main' into cutoff_classifier_again

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  8. TST metadarouting FixedThresholdClassifier

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  9. rename n_thresholds to thresholds

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  10. cover constant predictor error

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  11. TST some tests for get_response_values_binary

    @glemaitre
    glemaitre committed Apr 30, 2024
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Commits on May 2, 2024

  1. use conditional p(y|X) instead of posterior

    @glemaitre
    glemaitre committed May 2, 2024
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  2. be more explicit that strings need to be provided to objective_metric

    @glemaitre
    glemaitre committed May 2, 2024
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  3. factorize plotting into a function

    @glemaitre
    glemaitre committed May 2, 2024
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  4. fix typo in code

    @glemaitre
    glemaitre committed May 2, 2024
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  5. use proper scoring rule and robust estimator to scale

    @glemaitre
    glemaitre committed May 2, 2024
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  6. improve narrative

    @glemaitre
    glemaitre committed May 2, 2024
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  7. use grid-search

    @glemaitre
    glemaitre committed May 2, 2024
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  8. Apply suggestions from code review 

    Co-authored-by: Olivier Grisel <olivier.grisel@ensta.org>
    @glemaitre @ogrisel
    glemaitre and ogrisel committed May 2, 2024
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Commits on May 3, 2024

  1. remove constrainted metrics option

    @glemaitre
    glemaitre committed May 3, 2024
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  2. partial review

    @glemaitre
    glemaitre committed May 3, 2024
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  3. rename objective_metric to scoring

    @glemaitre
    glemaitre committed May 3, 2024
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  4. fix typo

    @glemaitre
    glemaitre committed May 3, 2024
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  5. remove pos_label and delegate to make_scorer

    @glemaitre
    glemaitre committed May 3, 2024
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