Skip to content
@sansomlab

sansomlab

Pinned

  1. cellhub cellhub Public

    Python pipelines for large-scale multimodal single-cell data analysis on HPC clusters

    Python 5 1

  2. gsfisher gsfisher Public

    R package for naive geneset over-enrichment testing.

    R 4

  3. cornet cornet Public

    Pipelines for correlation network analysis for gene expression data

    R 7 1

  4. tenx tenx Public

    Pipelines for the analysis of 10x single-cell RNA-sequencing data

    R 56 15

  5. txseq txseq Public

    Pipelines for computational analysis of transcriptome sequencing data

    Python 1 1

  6. HPCSetupGuide HPCSetupGuide Public

    Configuration and documentation for use of the University of Oxford's BMRC cluster

    Shell

Repositories

Showing 9 of 9 repositories
  • txseq Public

    Pipelines for computational analysis of transcriptome sequencing data

    Python 1 1 0 0 Updated Apr 24, 2024
  • HPCSetupGuide Public

    Configuration and documentation for use of the University of Oxford's BMRC cluster

    Shell 0 0 0 0 Updated Apr 11, 2024
  • cellhub Public

    Python pipelines for large-scale multimodal single-cell data analysis on HPC clusters

    Python 5 MIT 1 3 0 Updated Feb 27, 2024
  • scseq Public

    Pipelines for computational analysis of single-cell (and bulk) RNA-sequencing data

    Jupyter Notebook 2 3 0 1 Updated Oct 10, 2023
  • tenx Public

    Pipelines for the analysis of 10x single-cell RNA-sequencing data

    R 56 MIT 15 2 4 Updated Jul 12, 2023
  • CrossJCIInsight2022 Public

    Scripts accompanying Cross et al. JCI Insight 2022

    0 MIT 0 0 0 Updated Jan 12, 2023
  • gsfisher Public

    R package for naive geneset over-enrichment testing.

    R 4 MIT 0 0 0 Updated Jul 3, 2022
  • cornet Public

    Pipelines for correlation network analysis for gene expression data

    R 7 1 0 0 Updated Mar 13, 2021
  • arco Public

    automatic report compiler

    CSS 0 0 0 0 Updated Jun 4, 2020

People

This organization has no public members. You must be a member to see who’s a part of this organization.

Top languages

Loading…

Most used topics

Loading…