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Recommendation for multiple genome alignment #106

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snayfach opened this issue Nov 24, 2021 · 1 comment

snayfach commented Nov 24, 2021

Do the authors have any recommendations for a tool to generate fast bacterial genome alignments that can be input to snp-sites?

tasosmitsi commented Jan 28, 2022

If you are looking for a multiple sequence alignment you can try MAFFT. How long are these bacterial genome ?

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