spectrum-bias-adjust

This repository is for the analysis in the preprint:

Takahashi S, Peluso MJ, Hakim J, et al. SARS-CoV-2 serology across scales: a framework for unbiased seroprevalence estimation incorporating antibody kinetics and epidemic recency. medRxiv. Available at: https://www.medrxiv.org/content/10.1101/2021.09.09.21263139v1

Name		Name	Last commit message	Last commit date
Latest commit History 7 Commits
Code		Code
Data		Data
Results		Results
.gitattributes		.gitattributes
01a_Run_univariate_kinetics_model_by_assay_and_group.R		01a_Run_univariate_kinetics_model_by_assay_and_group.R
01b_Run_bivariate_kinetics_model_by_assay_and_group.R		01b_Run_bivariate_kinetics_model_by_assay_and_group.R
02_Run_EpiNow2_Japan.R		02_Run_EpiNow2_Japan.R
02_Run_EpiNow2_Manaus.R		02_Run_EpiNow2_Manaus.R
02_Run_EpiNow2_US.R		02_Run_EpiNow2_US.R
03_Analysis_Italy_2groups.R		03_Analysis_Italy_2groups.R
03_Analysis_Italy_3groups.R		03_Analysis_Italy_3groups.R
03_Analysis_Japan_2groups_1assay.R		03_Analysis_Japan_2groups_1assay.R
03_Analysis_Japan_2groups_2assays.R		03_Analysis_Japan_2groups_2assays.R
03_Analysis_Japan_3groups_1assay.R		03_Analysis_Japan_3groups_1assay.R
03_Analysis_Japan_3groups_2assays.R		03_Analysis_Japan_3groups_2assays.R
03_Analysis_Manaus_2groups.R		03_Analysis_Manaus_2groups.R
03_Analysis_Manaus_3groups.R		03_Analysis_Manaus_3groups.R
03_Analysis_Spain_2groups.R		03_Analysis_Spain_2groups.R
03_Analysis_Spain_3groups.R		03_Analysis_Spain_3groups.R
03_Analysis_US_2groups.R		03_Analysis_US_2groups.R
03_Analysis_US_3groups.R		03_Analysis_US_3groups.R
04_Figure_2.R		04_Figure_2.R
04_Figure_3.R		04_Figure_3.R
04_Figure_4_5.R		04_Figure_4_5.R
04_Figure_6.R		04_Figure_6.R
04_SuppFigure_22.R		04_SuppFigure_22.R
README.md		README.md

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