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Releases: saketkc/pysradb

v2.2.0

17 Sep 15:54
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Full Changelog: v2.1.0...v2.2.0

v2.1.0

16 May 14:26
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  • Fix for gse-to-srp returning unrequested GSEs #186
  • Fix for download using public_urls
  • Fix for gsm-to-srx returning false positives #165
  • Fix for delimiter not being consistent when metadata is printed on terminal #147
  • ENA search is currently broken because of an API change

Full Changelog: v2.0.2...v2.1.0

v2.0.2

09 Apr 19:03
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Full Changelog: v2.0.1...v2.0.2

v2.0.1

18 Mar 22:42
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Full Changelog: v2.0.0...v2.0.1

v2.0

23 Feb 22:20
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  • BREAKING change: Overhaul of how urls and associated metadata are returned (not backward compatible); all column names are lower cased by default
  • Fix extra space in "organism_taxid" column
  • Added support for Experiment attributes (#89 <https://github.com/saketkc/pysradb/issues/89#issuecomment-1439319532>)

Full Changelog: v1.4.2...v2.0.0

v1.4.2

17 Jul 13:53
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  • Fix ENA fastq fetching #163

Full Changelog: v1.4.1...v1.4.2

v1.4.1

06 Jun 02:15
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Full Changelog: v1.4.0...v1.4.1

  • Fix for fetching alternative URLs in metadata --detailed

v1.4.0

05 Jun 03:34
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  • Added ability to fetch alternative URLs (GCP/AWS) for metadata #161
  • Fix for xmldict 0.13.0 no longer defaulting to OrderedDict #159 by @zhoulytwinyu
  • Fix for missing experiment model and description in metadata #160

New Contributors

Full Changelog: v1.3.0...v1.4.0

v1.3.0

18 Feb 22:06
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1.3.0 (02-18-2022)


  • Add study_title to --detailed flag (#152 <https://github.com/saketkc/pysradb/issues/152>_)
  • Fix KeyError in metadata where some new IDs do not have any metadata (#151 <https://github.com/saketkc/pysradb/issues/151>_)

What's Changed

New Contributors

Full Changelog: v1.1.0...v1.3.0

v1.2.0

10 Jan 17:02
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  • Do not exit if a qeury returns no hits (#149)

Full Changelog: v1.1.0...v1.2.0