0.5.3

• experimental ancestor matrix feature

New aliases

• switch to numpyro==0.6.0 to avoid problems with github workflows
• updated alias table

Improved NowCastKnots

• Improvements to NowCastNodes class.

NowCastKnots

• MultiLineage uses a different combination of spline functions to regularise model predictions at the end of a time series.

Fixes in Truncated Knots

• Hot fixes in truncated knots.

Truncated Knotlist

• Improved Knot class to improve R values at the end of the time series.

Truncated Knotlist

• Improved Knot class to improve R values at the end of the time series.

Version 0.4.2

• added aggregate_log_R_lineage method.

Preprint Release

• Various bugfixes.
• Updates for new Preprint/Covince release.

ClockReset Model

• Included ClockReset model enabling timely variant introductions and inference via DirichletMultinomial.
• Various bug fixes.
• Fully refactored utils module.
• Inclusion of any tests.