GitHub - rordenlab/spmScripts: Handy scripts for SPM

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This is a collection of Matlab scripts that can help with using SPM and FSL. These scripts are also available from my lab website which includes a brief description about each script.

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Content Cell	Content Cell
Content Cell	Content Cell

Name		Name	Last commit message	Last commit date
Latest commit History 60 Commits
fiber_QA		fiber_QA
next_release		next_release
.DS_Store		.DS_Store
.gitignore		.gitignore
AtlasStatMap.m		AtlasStatMap.m
GPU_perm_test.m		GPU_perm_test.m
README.md		README.md
TPM4mm.nii		TPM4mm.nii
bmp_blend.m		bmp_blend.m
bmp_contrast.m		bmp_contrast.m
bmp_mexicanhat.m		bmp_mexicanhat.m
bmp_onCenter_offSurround.m		bmp_onCenter_offSurround.m
bmp_scramble.m		bmp_scramble.m
bmp_sinewave_1d.m		bmp_sinewave_1d.m
bmp_sinewave_2d.m		bmp_sinewave_2d.m
bmp_unsharpmask.m		bmp_unsharpmask.m
bmp_yuv.m		bmp_yuv.m
cleanup.m		cleanup.m
cmap2lut.m		cmap2lut.m
convert_ctp.m		convert_ctp.m
dicm_sort.m		dicm_sort.m
dilate_erode.m		dilate_erode.m
disco_sm.png		disco_sm.png
extract.exe		extract.exe
extract_brain.m		extract_brain.m
extractlx32		extractlx32
extractlx64		extractlx64
extractosx		extractosx
fix_qform.m		fix_qform.m
fsl_temporal_filt.m		fsl_temporal_filt.m
mni2fs_makegii.m		mni2fs_makegii.m
nii_3dcheckerboard.m		nii_3dcheckerboard.m
nii_anat.m		nii_anat.m
nii_atlas2nii.m		nii_atlas2nii.m
nii_batch12old.m		nii_batch12old.m
nii_change_datatype.m		nii_change_datatype.m
nii_cleanup5.m		nii_cleanup5.m
nii_clipeven_old.m		nii_clipeven_old.m
nii_combine_mask.m		nii_combine_mask.m
nii_complex2magPhase.m		nii_complex2magPhase.m
nii_contiguous.m		nii_contiguous.m
nii_coord2spheres.m		nii_coord2spheres.m
nii_cropVolumes.m		nii_cropVolumes.m
nii_ctsmooth.m		nii_ctsmooth.m
nii_dice.m		nii_dice.m
nii_dilate.m		nii_dilate.m
nii_dilate_outlines.m		nii_dilate_outlines.m
nii_dilate_vox.m		nii_dilate_vox.m
nii_diploe.m		nii_diploe.m
nii_dti2rgb.m		nii_dti2rgb.m
nii_dti_clean.m		nii_dti_clean.m
nii_dtibatch.m		nii_dtibatch.m
nii_enantiomorphic.m		nii_enantiomorphic.m
nii_enat_norm.m		nii_enat_norm.m
nii_extract.m		nii_extract.m
nii_fileparts.m		nii_fileparts.m
nii_fixnames.m		nii_fixnames.m
nii_fixslices.m		nii_fixslices.m
nii_flipap.m		nii_flipap.m
nii_fliplr.m		nii_fliplr.m
nii_flipz.m		nii_flipz.m
nii_fslflirt.m		nii_fslflirt.m
nii_fslver.m		nii_fslver.m
nii_getTR.m		nii_getTR.m
nii_gui.m		nii_gui.m
nii_i3m2nii.m		nii_i3m2nii.m
nii_isSPM12orNewer.m		nii_isSPM12orNewer.m
nii_jaccard.m		nii_jaccard.m
nii_label.m		nii_label.m
nii_loadhdrimg.m		nii_loadhdrimg.m
nii_lpi.m		nii_lpi.m
nii_make3d.m		nii_make3d.m
nii_make3d_new.m		nii_make3d_new.m
nii_make4d.m		nii_make4d.m
nii_makeDTI.m		nii_makeDTI.m
nii_makeseed.m		nii_makeseed.m
nii_mask.m		nii_mask.m
nii_meanBvec.m		nii_meanBvec.m
nii_mean_stdev.m		nii_mean_stdev.m
nii_mean_stdev_roi.m		nii_mean_stdev_roi.m
nii_merge.m		nii_merge.m
nii_merge_dki.m		nii_merge_dki.m
nii_merge_dki2k.m		nii_merge_dki2k.m
nii_merge_dki2k.m~		nii_merge_dki2k.m~
nii_merge_dti.m		nii_merge_dti.m
nii_mricro_roi2nii.m		nii_mricro_roi2nii.m
nii_nanzero.m		nii_nanzero.m
nii_neper.m		nii_neper.m
nii_new.m		nii_new.m
nii_nii2bvox.m		nii_nii2bvox.m
nii_nii2gii.m		nii_nii2gii.m
nii_nii2objMesh.m		nii_nii2objMesh.m
nii_nii2powerOf2.m		nii_nii2powerOf2.m
nii_nii2stl.m		nii_nii2stl.m
nii_nii2voi.m		nii_nii2voi.m
nii_nodz2node.m		nii_nodz2node.m
nii_orderBval.m		nii_orderBval.m
nii_p2z.m		nii_p2z.m
nii_pasl.m		nii_pasl.m
nii_plotBvec.m		nii_plotBvec.m

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