Skip to content

Issues: rdpstaff/classifier

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

22 Open 6 Closed
22 Open 6 Closed
Author
Filter by author
Label
Filter by label
Use alt + click/return to exclude labels
or ⇧ + click/return for logical OR
Projects
Filter by project
Milestones
Filter by milestone
Assignee
Filter by who’s assigned
Sort
Sort by
Newest Oldest Most commented Least commented Recently updated Least recently updated Best match
Most reactions
👍 👎 😄 🎉 😕 ❤️ 🚀 👀

Issues list

Training Data Site for build.xml is Defunct
#30 opened Apr 26, 2024 by Friend-of-Ollie
FYI: Trimming to region of interest
#28 opened Feb 2, 2023 by LaraMacheriotou
addFullLineage.py and lineage2taxTrain.py
#26 opened May 14, 2021 by LIU3379
why there are a lot of s__uncultured_bacterium_qiime_unique_taxon_tag_xxxx and norank_qiime_unique_taxon_tage was found in the taxonomy classification result
#25 opened Jan 25, 2021 by LuffyLuffy
Error while getting repo2.maven to /root/.ant/lib/ivy.jar
#24 opened Feb 11, 2020 by daywin94
1
Training the RDP classifier -c option
#23 opened Oct 26, 2018 by ddavis3739
Which is canonical, this github repo (v2.10.1) or sourceforge (v2.16)
#22 opened Nov 30, 2017 by gnewton
LOOT (by taxon) analysis: calculation error on % of misclassified Seqs?
#21 opened Aug 18, 2017 by dougwyu
custom training data error
#20 opened Jul 24, 2017 by TurbulentCupcake
how to perform leave one out testing using a confidence of 0?
#19 opened Mar 12, 2017 by TurbulentCupcake
How to format the taxonomy file to retrain classifier
#18 opened Nov 30, 2016 by yingeddi2008
36
Merge classification from different training set
#17 opened Oct 6, 2016 by complexgenome
Problem isntalling classifier
#16 opened Sep 7, 2016 by OrsonMM
4
Continuous errors with classifier subcommands - problem in tax file?
#14 opened Mar 28, 2016 by anniebtp
Is there a way to define a different k-mer? What way to chop up the reads?
#13 opened Mar 11, 2016 by yingeddi2008
How to map RDP Nomenclature to NCBI Nomenclature?
#12 opened Jan 24, 2016 by homopolymer
1
copy number file -c flag
#11 opened Aug 14, 2015 by complexgenome
4
Classifier and CPU consumption
#9 opened Mar 4, 2015 by fescudie
6
Problem with taxasim in headless mode
#8 opened Mar 3, 2015 by iimog
1
NullPointerException with crossvalidate
#6 opened Nov 24, 2014 by iimog
@rdpstaffmsu
3
Exception handling
#5 opened Aug 19, 2014 by dbrami
@rdpstaffmsu
1
Dereplication pipeline doesn't work
#3 opened Mar 6, 2014 by GiBacci
ProTip! Type g p on any issue or pull request to go back to the pull request listing page.