minor

.github/workflows/ci.yml

@@ -29,6 +29,6 @@ jobs:
         run: python setup.py install 
 
       - name: Test pystokes
-        run: cd tests && python test_short.pyx
+        run: cd tests && python test_short.py
 
 

.github/workflows/run_notebooks.yml

@@ -21,6 +21,9 @@ jobs:
       - name: Install dependencies 
         run: python -m pip install -r requirements.txt
 
+      - name: Install nbconvert 
+        run: python -m pip install nbconvert
+
       - name: Install pystokes 
         run: python setup.py install 
 

README.md

@@ -1,15 +1,15 @@
 ![Imagel](https://raw.githubusercontent.com/rajeshrinet/pystokes/master/examples/banner.png)
 
 
-## PyStokes: phoresis and Stokesian hydrodynamics in Python  [![Binder](https://mybinder.org/badge_logo.svg)](https://mybinder.org/v2/gh/rajeshrinet/pystokes/master?filepath=binder) ![Installation](https://github.com/rajeshrinet/pystokes/workflows/CI/badge.svg) ![Notebooks](https://github.com/rajeshrinet/pystokes/workflows/notebooks/badge.svg) [![Documentation Status](https://readthedocs.org/projects/pystokes/badge/?version=latest)](https://pystokes.readthedocs.io/en/latest/?badge=latest) [![DOI](https://joss.theoj.org/papers/10.21105/joss.02318/status.svg)](https://doi.org/10.21105/joss.02318) [![PyPI](https://img.shields.io/pypi/v/pystokes.svg)](https://pypi.python.org/pypi/pystokes) [![Python Version](https://img.shields.io/pypi/pyversions/pystokes)](https://pypi.org/project/pystokes) [![Downloads](https://pepy.tech/badge/pystokes)](https://pepy.tech/project/pystokes)  
+## PyStokes: phoresis and Stokesian hydrodynamics in Python ![Installation](https://github.com/rajeshrinet/pystokes/workflows/CI/badge.svg) ![Notebooks](https://github.com/rajeshrinet/pystokes/workflows/notebooks/badge.svg) [![Documentation Status](https://readthedocs.org/projects/pystokes/badge/?version=latest)](https://pystokes.readthedocs.io/en/latest/?badge=latest) [![DOI](https://joss.theoj.org/papers/10.21105/joss.02318/status.svg)](https://doi.org/10.21105/joss.02318) [![PyPI](https://img.shields.io/pypi/v/pystokes.svg)](https://pypi.python.org/pypi/pystokes) [![Python Version](https://img.shields.io/pypi/pyversions/pystokes)](https://pypi.org/project/pystokes) [![Downloads](https://pepy.tech/badge/pystokes)](https://pepy.tech/project/pystokes)  
 
 [About](#about) 
 | [Blog](https://rajeshrinet.github.io/pystokes-blog/)
 | [News](#news) 
 | [Installation](#installation) 
 | [Documentation](https://pystokes.readthedocs.io/en/latest/) 
 | [Examples](#examples) 
-| [Publications ](#publications)
+| [Publications](#publications)
 | [Gallery](https://github.com/rajeshrinet/pystokes/wiki/Gallery)
 | [Support](#support) 
 | [License](#license)
@@ -47,7 +47,6 @@ principle is available to rationalize crystallization. In this [work](https://do
 
 
 ## Installation
-You can take PyStokes for a spin **without installation**: [![Binder](https://mybinder.org/badge_logo.svg)](https://mybinder.org/v2/gh/rajeshrinet/pystokes/master?filepath=binder). Please be patient while [Binder](https://mybinder.org/v2/gh/rajeshrinet/pystokes/master?filepath=binder) loads.
 
 ### From a checkout of this repo
 
@@ -154,7 +153,9 @@ Other examples include
 * [Autophoretic arrest of flow-induced phase separation](https://github.com/rajeshrinet/pystokes/blob/master/examples/ex6-arrestedCluster.ipynb)
 
 
-## Selected publications
+## Publications
+
+A selected list of publications is given below. See full publication list [here](https://github.com/rajeshrinet/pystokes/wiki/Publications).
 
 * [PyStokes: phoresis and Stokesian hydrodynamics in Python](https://doi.org/10.21105/joss.02318), R Singh and R Adhikari, **Journal of Open Source Software**, 5(50), 2318, (2020). *(Please cite this paper if you use PyStokes in your research)*.
 
@@ -171,7 +172,6 @@ Other examples include
 
 * [Universal hydrodynamic mechanisms for crystallization in active colloidal suspensions](https://doi.org/10.1103/PhysRevLett.117.228002), R Singh and R Adhikari,  **Physical Review Letters**, 117, 228002 (2016)
 
-See full publication list [here](https://github.com/rajeshrinet/pystokes/wiki/Publications).
 
 ## Support