automate dataflow annotation #513
Workflow file for this run
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| # This workflow will install Python dependencies, run tests and lint with a single version of Python | |
| # For more information see: https://help.github.com/actions/language-and-framework-guides/using-python-with-github-actions | |
| name: Build | |
| on: | |
| push: | |
| branches: [ devel ] | |
| pull_request: | |
| branches: [ devel ] | |
| jobs: | |
| tests: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v2 | |
| with: | |
| fetch-depth: 2 | |
| - name: Set up Python 3.7 | |
| uses: actions/setup-python@v2 | |
| with: | |
| python-version: 3.7 | |
| - name: Install dependencies | |
| run: | | |
| python -m venv testenv | |
| . testenv/bin/activate | |
| python -m pip install --upgrade pip setuptools | |
| python -m pip install git+https://github.com/radical-cybertools/radical.utils.git@devel | |
| python -m pip install git+https://github.com/radical-cybertools/radical.saga.git@devel | |
| python -m pip install git+https://github.com/radical-cybertools/radical.pilot.git@devel | |
| python -m pip install --upgrade . | |
| python -m pip install -r requirements-tests.txt | |
| - name: Test with pytest | |
| env: | |
| LOC: testenv/lib/python3.7/site-packages | |
| run: | | |
| . testenv/bin/activate | |
| coverage run --include=$LOC/radical/entk/* -m pytest -ra --timeout=600 -vvv --showlocals tests/test_component/ tests/test_integration/ tests/test_utils/ | |
| coverage combine | |
| coverage xml | |
| - name: Codecov | |
| uses: codecov/codecov-action@v1 | |
| with: | |
| file: ./coverage.xml | |
| linting: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v2 | |
| with: | |
| fetch-depth: 2 | |
| - name: Set up Python 3.7 | |
| uses: actions/setup-python@v2 | |
| with: | |
| python-version: 3.7 | |
| - name: Install dependencies | |
| run: | | |
| python -m venv testenv | |
| . testenv/bin/activate | |
| python -m pip install --upgrade pip setuptools | |
| python -m pip install git+https://github.com/radical-cybertools/radical.utils.git@devel | |
| python -m pip install git+https://github.com/radical-cybertools/radical.saga.git@devel | |
| python -m pip install git+https://github.com/radical-cybertools/radical.pilot.git@devel | |
| python -m pip install --upgrade . | |
| python -m pip install -r requirements-tests.txt | |
| - name: Lint with flake8 and pylint | |
| run: | | |
| . testenv/bin/activate | |
| LOG=`git log -n 1 | grep Merge || true` | |
| NEW=`echo $LOG | cut -d ' ' -f2` | |
| OLD=`echo $LOG | cut -d ' ' -f3` | |
| test -z "$NEW" && NEW=HEAD | |
| test -z "$OLD" && OLD=HEAD | |
| DIFF=`git diff --name-only --diff-filter=db $NEW..$OLD` | |
| DIFF=$(echo $DIFF | grep -o -e '\b[^ ]*.py\b' | sed "s|^|$PWD/|") | |
| test -z "$DIFF" && echo 'nothing to flake8' || flake8 $DIFF | |
| test -z "$DIFF" && echo 'nothing to pylint' || pylint $DIFF | |