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SampleSheet Validator

Pytest

Overview

This little streamlit app provides a simple interface to validate the sample sheet using for demultiplexing samples from the Nextseq.

Features

  • If the i7 and i5 sequences are not correct for demultiplexing. It will search the index name instead of the index sequence for validation.

  • If the i7 and i5 sequences per sample are duplicated.

  • If the sample IDs contains special characters that are not allowed.

  • For now, only nextera_xt_v2 adapters are supported.

Installation & Usage

The app is deployed at: https://illumina-ss-validator.streamlit.app

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Sample sheet validator for demultiplexing Illumina runs

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