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QBATCH(1) User Contributed Perl Documentation NAME qbatch - submits a command line to Grid Engine or PBS via qsub SYNOPSIS qbatch [options] [--queue] -- command qbatch is designed to be inserted before any command that you would usually run from the command line. In case of argument collision where both your command and qbatch share an option such as --verbose be sure to use the '--' syntax to split qbatch options from the commands options $ qbatch --verbose -- mincmath --verbose ... DESCRIPTION qbatch is a quick hack if you don't want to write a qsub script The idea is to just bung qbatch in front of any command you would normally enter on the command line. (as per 'nice') eg: $ qbatch ls -F $ qbatch -q wb325.q@taylor -N job23 -- mincmath \ fred.mnc .. Problems or comments should be sent to: a.janke@gmail.com OPTIONS -v, --verbose Be noisy when doing things (most importantly this will echo the resulting script to the terminal) --verbose Print version number and exit -h, --help Dump some quick help output --man Dump a man page -f, --fake Don't run anything, This is useful when combined with --verbose or --script -s, --script Dont run anything, just output the batch script to the specified filename --type Type of queing system, currently only pbs and gri- dengine are supported -q, --queue Specify a queue to run a job in. Use something like all.q@hostname to specify a particular host. Defaults to all.q, the default SGE queue -N, --name Specify a job name to run the job as. By default this will be "STDIN" -d, --depends Specify a list of job dependencies by job name or num- ber which have to run before this job will -l, --logfile Logfile for output of the command. By Default this will make a file in the current directory called qbatch-<PID>.log where PID is the Process ID of the instance of qbatch -j, --jid return only the job id of the submitted job on STDOUT AUTHOR Andrew Janke - a.janke@gmail.com
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A simple unified interface to gridengine and PBS
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