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Merge pull request #70 from djhoese/wheels-numpy2 #248

Merge pull request #70 from djhoese/wheels-numpy2

Merge pull request #70 from djhoese/wheels-numpy2 #248

Workflow file for this run

name: CI
on: [push, pull_request]
jobs:
test:
runs-on: ${{ matrix.os }}
continue-on-error: ${{ matrix.experimental }}
strategy:
fail-fast: false
matrix:
os: ["windows-latest", "ubuntu-latest", "macos-latest"]
python-version: ["3.10", "3.11", "3.12"]
experimental: [false]
include:
- python-version: "3.12"
os: "ubuntu-latest"
experimental: true
env:
PYTHON_VERSION: ${{ matrix.python-version }}
OS: ${{ matrix.os }}
UNSTABLE: ${{ matrix.experimental }}
ACTIONS_ALLOW_UNSECURE_COMMANDS: true
steps:
- name: Checkout source
uses: actions/checkout@v4
- name: Setup Conda Environment
uses: conda-incubator/setup-miniconda@v3
with:
miniforge-variant: Mambaforge
miniforge-version: latest
use-mamba: true
channel-priority: strict
python-version: ${{ matrix.python-version }}
activate-environment: test-environment
environment-file: continuous_integration/environment.yaml
- name: Install unstable dependencies
if: matrix.experimental == true
shell: bash -l {0}
run: |
python -m pip install \
-f https://pypi.anaconda.org/scientific-python-nightly-wheels/simple/ \
--no-deps --pre --upgrade \
matplotlib \
numpy \
pandas \
scipy; \
python -m pip install \
--no-deps --upgrade \
git+https://github.com/dask/dask \
git+https://github.com/dask/distributed \
git+https://github.com/zarr-developers/zarr \
git+https://github.com/pydata/bottleneck \
git+https://github.com/pydata/xarray;
- name: Install geotiepoints
shell: bash -l {0}
run: |
pip install -e .
python setup.py build_ext --inplace --cython-coverage --force
- name: Run unit tests
shell: bash -l {0}
run: |
pytest --cov=geotiepoints geotiepoints/tests --cov-report=xml --cov-report=
# FIXME: These fail
# - name: Test website
# shell: bash -l {0}
# run: |
# cd doc && mkdir doctest && sphinx-build -E -n -b doctest ./source ./doctest && cd ..
- name: Upload unittest coverage to Codecov
uses: codecov/codecov-action@v4
with:
flags: unittests
file: ./coverage.xml
env_vars: OS,PYTHON_VERSION,UNSTABLE
- name: Coveralls Parallel
uses: AndreMiras/coveralls-python-action@develop
with:
flag-name: run-${{ matrix.test_number }}
parallel: true
if: runner.os == 'Linux'
coveralls:
needs: [test]
runs-on: ubuntu-latest
steps:
- name: Coveralls Finished
uses: AndreMiras/coveralls-python-action@develop
with:
parallel-finished: true