v4.10

What's Changed

Bug Fixes

• TST: avoid using GeoDa Columbus from geodatasets by @martinfleis in #673

Enhancements

• ENH: add subgraph method to Graph to get subsets by @martinfleis in #640
• fast-path for initialisation of Graph for adjacency that is known to be sorted by @martinfleis in #635
• support cliques as a resolver of coincident points in Graph by @knaaptime in #647
• ENH: Graph.eliminate_zeros, refactor isolates by @martinfleis in #634
• ENH: include assign_self_weight (formerly fill_diagonal) in Graph by @martinfleis in #670
• ENH: add Graph.apply, Graph.aggregate and allow callable as transformation in transform by @martinfleis in #676
• Matching by @ljwolf in #666
• ENH: geometry agnostic Voronoi based on shapely by @martinfleis in #678

Maintenance

• lint & format io/iohandlers{a-d}.py by @jGaboardi in #637
• lint & format io/iohandlers{g-m}.py by @jGaboardi in #638
• lint & format io/iohandlers{p-s}.py by @jGaboardi in #641
• lint & format io/iohandlers{t-w}.py by @jGaboardi in #642
• lint & format io/iohandlers/tests/*.py by @jGaboardi in #643
• lint & format io/{tests, util}/*.py part 1 by @jGaboardi in #644
• lint & format io/{tests, util}/*.py part 2 by @jGaboardi in #645
• lint & format – io/iohandlers/* by @jGaboardi in #630
• lint & format io/{tests, util}/*.py part 3 by @jGaboardi in #646
• lint & format weights/*.py part 1 by @jGaboardi in #648
• lint & format weights/*.py part 2 by @jGaboardi in #650
• lint & format weights/*.py part 3 by @jGaboardi in #651
• lint & format weights/*.py part 4 by @jGaboardi in #652
• lint & format weights/*.py part 5 by @jGaboardi in #653
• lint & format weights/*.py part 6 by @jGaboardi in #654
• lint & format weights/*.py part 7 by @jGaboardi in #655
• lint & format weights/*.py part 8 by @jGaboardi in #658
• revisit cg/*.py for missed lint & format by @jGaboardi in #659
• correct in-line ruff syntax by @jGaboardi in #660
• final lint/format run through & update pre-commit by @jGaboardi in #661
• Formatting via ruff by @jGaboardi in #662
• [pre-commit.ci] pre-commit autoupdate by @pre-commit-ci in #671
• CI: partially resolve reverse dep testing issues by @martinfleis in #682

Other Changes

• GHA: allow multi-core testing again by @martinfleis in #636
• GHA: include reverse dependency testing by @martinfleis in #639
• DOC: include docstring in matching by @martinfleis in #680
• update chat links: gitter >> discord by @jGaboardi in #679
• TST: resolve FutureWarnings in graph apply tests by @martinfleis in #686
• REF: remove usage of deprecated cascaded_union by @martinfleis in #685

New Contributors

• @pre-commit-ci made their first contribution in #671

Full Changelog: v4.9.2...v4.10

v4.8.1

Full Changelog: v4.8.0...v4.8.1

v4.8.1rc1

Full Changelog: v4.8.0...v4.8.1rc1

v4.9.2

What's Changed

Maintenance

• remove xarray as hard dependency by @jGaboardi in #629

Full Changelog: v4.9.1...v4.9.2

v4.9.1

What's Changed

Other Changes

• pass kwargs to explore by @martinfleis in #627

Full Changelog: v4.9.0...v4.9.1

v4.9.0

What's Changed

Bug Fixes

• fix fileio regression by @jGaboardi in #625

Enhancements

• ENH: explore method for graph by @knaaptime in #617

Maintenance

• CI against Python 3.12 by @jGaboardi in #585
• MAINT: dealing with sqlalchemy & geomet by @jGaboardi in #592
• convert README to markdown by @jGaboardi in #598
• begin the repo linting by @jGaboardi in #597
• remove test_NameSpace.py by @jGaboardi in #600
• TST: convert unittests to pytest by @martinfleis in #601
• remove redundant .coveragerc by @jGaboardi in #604
• lint ./examples/* by @jGaboardi in #607
• ./cg/*.py – format, lint, & remove docstring spaces by @jGaboardi in #608
• format, lint, numpydoc – cg/ops/*.py by @jGaboardi in #610
• format & lint – cg/ops/tests*.py by @jGaboardi in #611
• format & lint – cg/tests/*.py by @jGaboardi in #614
• lint graph/base.py by @jGaboardi in #615
• lint graph/_*.py by @jGaboardi in #618
• lint & format graph/tests/*.py by @jGaboardi in #619
• lint & format io/*.py by @jGaboardi in #620
• lint & format – io/geotable/* by @jGaboardi in #622

Other Changes

• Delay example data dir creation, add fallback for unwriteable $HOME by @fbdtemme in #583
• manual trigger for CI by @jGaboardi in #584
• avoid could_be_isomorphic on nx 3.2 by @martinfleis in #586
• vectorize centroid in W.plot by @martinfleis in #465
• MAINT: avoid most of the warnings coming from dev CI by @martinfleis in #591
• Print spatial versions in CI by @jGaboardi in #613
• ENH: add vectorized plotting to Graph by @martinfleis in #593
• fix index check for precomputed graph distances by @knaaptime in #616
• TST: ignore pandas dev blockmanager warnings by @martinfleis in #621

New Contributors

• @fbdtemme made their first contribution in #583

Full Changelog: v4.8.0...v4.9.0

v4.8.0

What's Changed

Bug Fixes

• fix indexing issue with adjlist construction by @ljwolf in #528
• custom ids for W.asymmetry (#540) by @jGaboardi in #543

Enhancements

• TST: fix tests of the Graph class by @martinfleis in #541
• graph.Graph build_* constructors by @martinfleis in #542

Maintenance

• drop 3.7 support by @jGaboardi in #502
• set nopython=True in jit in alpha shapes by @martinfleis in #560
• overhaul infrastructure by @knaaptime in #579

Other Changes

• Add start of workbench notebook by @darribas in #392
• xarray geograph implementation by @ljwolf in #395
• Expand weights benchmark by @martinfleis in #398
• Draft of adjacency table as df by @sjsrey in #397
• Fix warnings from Sphinx by @QuLogic in #492
• Fix Linux user path test by @QuLogic in #491
• Implements W.from_WSP by @sjsrey in #496
• ENH: add W.to_sparse W.from_sparse by @sjsrey in #498
• Remove automatic polling of remotes by @sjsrey in #504
• API: Change the handling of IDs in from_dataframe constructors by @martinfleis in #477
• Remove sklearn dependency by @sjsrey in #509
• Removing internal use of id_order in to_adjlist by @sjsrey in #510
• Handle set_index properly in to_adjlist by @sjsrey in #511
• CI: revamp CI matrix and set bump minimal requirements by @martinfleis in #521
• REF: use shapely 2 instead of pygeos by @martinfleis in #523
• TST: fix sparse instance assertion by @martinfleis in #532
• BUG: fix weights plotting by @martinfleis in #533
• BUG: fix WSP2W weights casting by @martinfleis in #539
• Test graph class by @martinfleis in #536
• Explicitly set nopython=False in numba.jit by @robna in #535
• Geographs _triangulation weights by @sjsrey in #537
• clarify Graph.asymmetry() docstring by @jGaboardi in #546
• expand graph.Graph constructors and other functionality by @martinfleis in #544
• CI/COMPAT: update CI actions and dev channel setup, fix scipy compatibility by @martinfleis in #550
• BUG: fix Graph.to_W by @martinfleis in #551
• Intercept Coincident points by @ljwolf in #548
• fix piping of constructors to Graph after #548 by @martinfleis in #553
• tests for clique policy in triangulation weights by @sjsrey in #552
• Coindicent tests by @martinfleis in #554
• adjacency as mutliindex series by @martinfleis in #557
• add from_adjacency and handle sorting by @knaaptime in #555
• minor cleanups of geographs by @martinfleis in #559
• perimeter weights, fix kernel, set_ops by @martinfleis in #561
• Geographs by @ljwolf in #563
• remove conftest.py in graph tests by @jGaboardi in #565
• finalise contiguity graph builders by @martinfleis in #566
• implement fuzzy contiguity on Graph by @martinfleis in #564
• Update test_contiguity.py – minor typos by @jGaboardi in #567
• Revert "Bump codecov/codecov-action from 3 to 4" by @jGaboardi in #570
• BUG: fix graph kernel builder when kernel returns zero by @martinfleis in #569
• DOC: add Graph to API docs by @martinfleis in #572
• finalise kernel constructors in graph by @martinfleis in #571
• triangulation tests + better ci setup by @martinfleis in #574
• implement set ops and to_networkx by @martinfleis in #575
• TST: properly skip isomorphic test by @martinfleis in #576
• implement higher_order, components via sparse.matrix by @martinfleis in #577
• GHA: update release action by @martinfleis in #578
• Update release action, etc. to prep for v4.8.0 by @jGaboardi in #580
• README is rst, not md --> update pyproject.toml by @jGaboardi in #581

New Contributors

• @robna made their first contribution in #535

Full Changelog: v4.7.0...v4.8.0

v4.8.0rc2

What's Changed

Maintenance

• overhaul infrastructure by @knaaptime in #579

Other Changes

• GHA: update release action by @martinfleis in #578
• Update release action, etc. to prep for v4.8.0 by @jGaboardi in #580
• README is rst, not md --> update pyproject.toml by @jGaboardi in #581

Full Changelog: v4.8.0rc1...v4.8.0rc2

Release v4.8.0rc1

Changes

Version 4.8.0rc1 (2023-09-29)

We closed a total of 2 issues (enhancements and bug fixes) through 1 pull requests, since our last release on 2023-09-29.

Issues Closed

• implement higher_order, components via sparse.matrix (#577)

Pull Requests

• implement higher_order, components via sparse.matrix (#577)

The following individuals contributed to this release:

Release v4.7.0

Changes

Version 4.7.0 (2022-11-17)

We closed a total of 3 issues (enhancements and bug fixes) through 1 pull requests, since our last release on 2022-11-15.

Issues Closed

• address ShapelyDeprecationWarning The 'type' attribute is... (#487)
• type vs. geom_type with shapely (#488)

Pull Requests

• type vs. geom_type with shapely (#488)

The following individuals contributed to this release: