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Use 'standard' file extensions for output files #139

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Reference Issue

Fixes #134

What does this pull request implement/fix? Explain your changes.

This PR patches the relevant class instance methods to use the following file extensions, rather than just .submit for everything:

  • use .dag for dag files
  • use .sub for submit files

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@duncanmmacleod
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@GregoryAshton, can you comment on how disruptive this change would be for, e.g, the Bilby (pipe) workflows? Do other parts of the workflow presume hardcoded .submit file extensions?

@GregoryAshton
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@duncanmmacleod from a brief check, I'm fairly certain there is only a printed statement on how to submit the file which would need to be changed.

@duncanmmacleod duncanmmacleod added this to the PyCondor 0.7.0 milestone Jun 27, 2022
@jodergrosse
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I did use a similar patch. Didn't have any issues with it and would agree, that it is that simple to change.

- use `.dag` for dag files
- use `.sub` for submit files

Fixes pycondor#134
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Use 'standard' file extensions for dag and sub files
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