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28 Open 366 Closed
28 Open 366 Closed
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Issues list

hetionet does not work
#502 opened Jul 20, 2023 by chaxor
1
Getting problems with examples (pybel)
#501 opened May 6, 2023 by flalix
1
Unorganized data to_sif and No attribute 'to_triples_file
#499 opened Apr 23, 2022 by ahmedibatta
Cannot write the graph in any extension
#498 opened Apr 23, 2022 by ahmedibatta
Problem getting a BEL graph from the Fraunhofer OrientDB
#496 opened Oct 15, 2021 by mjmoron
2
Challenge writing INDRA statements to nodelink and reading it back in to pybel
#493 opened May 4, 2021 by djinnome
2
Troubles with loading .json files created with pybel 14.0.8
#492 opened Apr 29, 2021 by leon-k-martin
4
Add HTML summary for better jupyter notebook output
#489 opened Apr 14, 2021 by cthoyt
collapse_nodes does not apply to members of ListAbundance bug
#480 opened Jan 14, 2021 by ddomingof
1
@cthoyt
3
Add postgres and mysql container tests to GitHub Actions
#476 opened Nov 23, 2020 by cthoyt
@cthoyt
Add default regex namespaces for all MIRIAM entries
#457 opened Jul 16, 2020 by cthoyt v0.15.0
MongoDB Export I/O
#452 opened Jul 2, 2020 by cthoyt
1
Add RDF export I/O
#445 opened Jun 16, 2020 by cthoyt
1
@cthoyt
CellDesigner Importer I/O
#440 opened May 16, 2020 by cthoyt
Automatically fix edges containing degradations
#438 opened May 16, 2020 by cthoyt
ImportError: cannot import name 'write_namespace'
#437 opened May 16, 2020 by charalamm
2
to_bel_script() invokes a TypeError: make_knowledge_header() missing 1 required positional argument: 'name'
#436 opened May 13, 2020 by djinnome
4
Jupyter notebook integration via cytoscape
#433 opened May 1, 2020 by cthoyt
SBGN Importer I/O
#423 opened Apr 18, 2020 by cthoyt
1
@cthoyt
BEL 2.1 Upgrade Script
#419 opened Apr 2, 2020 by cthoyt
@cthoyt
Export BEL to WikiPathways GPML I/O
#392 opened Oct 3, 2019 by cthoyt
@cthoyt
1
Inference for regulation of protein translation enhancement
#376 opened Jan 16, 2019 by cthoyt
Better IO for parser exceptions
#367 opened Dec 26, 2018 by cthoyt
Include SQLAlchemy models for NetworkSet and Query
#356 opened Dec 1, 2018 by cthoyt
Improve speed of network insert
#321 opened Jul 23, 2018 by cthoyt
ProTip! Exclude everything labeled bug with -label:bug.