TEAM DOUDNA 😎

Be like stem cells, differentiate yourself from other

About the Internship

HackBio is a virtually regimented research internship that is practice oriented and focused on equipping scientists with advanced bioinformatics and computational biology skills, by the end of the internship, successful interns should have:

• Honed their skills in a specific bioinformatics method
• Have at least a peer-reviewed article to show for the internship experience.

About us

“The more we know, the more we realize there is to know." -Jennifer Doudna

We are Team Doudna! ☺ Our team consists of 20 brilliant young and curious minds constantly looking for scientific solutions for today’s global issues. Please feel free to contact us if science is your discipline too. Let’s unravel science together!❤

CONTACT US

• Email : teamdoudna@gmail.com

Team information

Task Status👇

• 20 persons completed

• 1. Isha Team leader - Python
• 2. Premnath - Python
• 3. Lakshini - R
• 4. Morali - Python
• 5. Adedoyin - Python
• 6. Shalini - PHP
• 7. Akanksha - Bash
• 8. Kartik - R
• 9. Shabnam - Ruby
• 10. Anjali - Python
• 11. Vivian - Perl
• 12. Jovel - Python
• 13. Devika- JAVA
• 14. Fatima - Python
• 15. Azeezat- Python
• 16. Fadekemi - Python
• 17. Adedamola - Python
• 18. Neemah - Python
• 19. Blessing - Python
• 20. Darmolarr- R

(Will be updated soon once we get full info about team members)

Objective (For team members)

Stage 0️⃣

• Update your slack workspace tag to [0] and put in your biostack
• Go to your profile and update your status. Also under "Edit profile" in "What I do" row put your biostack

• note there are 8 biostacks that define your area of specialization:
  • Genomics
  • Drug development
  • Vaccine informatics
  • Medicinal chemistry
  • Cheminformatics
  • Data analytics
  • Software development
  • Science communication

• Individuals should write a script (using any language) that prints your name, your email, your slack ID (with @) , your biostack, Twitter ID and Hamming distance(Between Slack ID and Twitter ID)

• Note that we have to have at least 7 different languages. IMPORTANT: Inform the version of the program. Follow below to find yours:

  • Python

  • Java

  • Ruby

  • R

  • Perl

  • PHP

  • Bash

  • Any other that you know (please inform us on our channel)

• Create your own repository on Github. You will use it to first upload your script to Github *Push the script to our team’s github repository
  • Fork the team's repo on the top right of your screen on github
  • commit the file and create a pull request to the master
• Collaboratively as a team, include a bash script that clones the git repo, and generates a CSV file from all the outputs of your team’s scripts
• Submit your team’s github link to ​only​ the bash script

Output Template (Your script output should be something like this)

*Your full name*, *Your e-mail*, @*username*, *Name of biostack you chose*, @*username*, *Hamming distance between SLACK USERNAME and TWITTER HANDLE*

After you get the desired output, please name your file yourname_stage_0_script.py/R/sh etc; An example: Stage0_Premnath_script.py

List of tools used

• Slack
• GitHub
• Ubuntu
• Jupyter notebook
• Google Account
• R studio
• PyCharm
• Windows power Shell
• Google Colab
• OnlineGDB online compiler (https://www.onlinegdb.com/)

Packages Used

Name	Language	Script	Installation(Commands in Linux console/WSL)
Isha Barve	Python	Stage0_Isha_script.py	sudo apt install python3.8
Premnath	Python	Stage0_Premnath_script.py	sudo apt install python3.8
Lakshini	R	stage0_Lakshini_Kannan_script.R	sudo apt install r-base
Morali	Python	Stage0_Morali_Shah_script.py	sudo apt install python3.8
Adedoyin	Python	Stage0_Adedoyin_Script.py	sudo apt install python3.8
Shalini	PHP	STAGE0_SHALINI_GUPTA_SCRIPT.php	sudo apt install php-fpm
Akanksha	Bash	Stage0_akanksha_script.sh	Nil
Shabnam	Ruby	Stage0_Shabnam_script.rb	sudo apt install ruby
Anjali	Python	Stage0_Anjali_Script.py	sudo apt install python3.8
Vivian	Perl	Stage0_Vivian_script.pl	sudo apt-get install perl
Jovel	Python	Stage_0_Jovel_script.py	sudo apt install python3.8
Devika	JAVA	Stage0_DEVIKA_script.java	sudo apt-get install default-jdk
Fatima	Python	stage0_Fatima_script.py	sudo apt install python3.8
Fadekemi	Python	Stage0_Fadekemi_script.py	sudo apt install python3.8
Kartik	R	Stage0_Kartik_Sawant_script.R	sudo apt install r-base
Adedamola	Python	Stage0_Adedamola_script.py	sudo apt install python3.8
Salami Habeeb	R	stage0_Darmolarr_script.R	sudo apt install r-base
Idowu Jinadu	Python	Stage0_Neemah_Script.py	sudo apt install python3.8
Blessing	Python	Stage0_Blessing_Script.py	sudo apt install python3.8
Azeezat	Python	Stage0_Azeezat.script.py	sudo apt install python3.8

Workflow

If you guys have any doubts, drop your queries in our group channel!😁