pombo-lab
Popular repositories
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Meltron
Meltron PublicForked from DominikSzabo1/Meltron
a statistical framework to detect differences in chromatin contact density at genomic regions of interest
R 3
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WinickNg_Kukalev_Harabula_Nature_2021
WinickNg_Kukalev_Harabula_Nature_2021 PublicCollection of supplementary data and code for the publication W. Winick-Ng, A. Kukalev, I. Harabula "Cell-type specialization is encoded by specific chromatin topologies" (2021) Nature
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multiplex-gam-2023
multiplex-gam-2023 PublicAnalysis scripts for Multiplex-GAM paper (Beagrie, Thieme, Annunziatella et al. 2023)
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GAM_trans_cis_ratio
GAM_trans_cis_ratio PublicForked from DominikSzabo1/GAM_trans_cis_ratio
Calculation of trans-cis NPMI ratios from GAM data
R 1
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gamtools-guix
gamtools-guix PublicForked from rbeagrie/gamtools-guix
Guix channel definition for gamtools
Scheme 1
Repositories
- MELTRONIC Public Forked from DominikSzabo1/MELTRONIC
Detection of chromatin melting and condensation events in regions of interest from GAM data
- multiplex-gam-2023 Public
Analysis scripts for Multiplex-GAM paper (Beagrie, Thieme, Annunziatella et al. 2023)
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- WinickNg_Kukalev_Harabula_Nature_2021 Public
Collection of supplementary data and code for the publication W. Winick-Ng, A. Kukalev, I. Harabula "Cell-type specialization is encoded by specific chromatin topologies" (2021) Nature
- 4DN_JAWG_H1 Public
- GAM_trans_cis_ratio Public Forked from DominikSzabo1/GAM_trans_cis_ratio
Calculation of trans-cis NPMI ratios from GAM data
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