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pnavaro committed Sep 11, 2023
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6 changes: 3 additions & 3 deletions 02-Installation.html
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Expand Up @@ -481,8 +481,8 @@ <h1>Installation<a class="headerlink" href="#installation" title="Permalink to t
<p><a class="reference external" href="https://docs.mamba.io/projects/mamba/en/latest/user-guide/getting-started.html">Ref: Getting started with mamba</a></p>
<!-- #region {"slideshow": {"slide_type": "slide"}} -->
<section id="install-anamamba-large-or-minimamba-small-or-miniforge-best">
<h2>Install <a class="reference external" href="https://www.anamamba.com/downloads">Anamamba</a> (large) or <a class="reference external" href="https://mamba.io/minimamba.html">Minimamba</a> (small) or <a class="reference external" href="https://github.com/mamba-forge/miniforge/releases">Miniforge</a> (best)<a class="headerlink" href="#install-anamamba-large-or-minimamba-small-or-miniforge-best" title="Permalink to this heading">#</a></h2>
<div class="highlight-bash notranslate"><div class="highlight"><pre><span></span>wget<span class="w"> </span>https://github.com/mamba-forge/miniforge/releases/latest/download/Mambaforge-Linux-x86_64.sh
<h2>Install <a class="reference external" href="https://www.anamamba.com/downloads">Anamamba</a> (large) or <a class="reference external" href="https://mamba.io/minimamba.html">Minimamba</a> (small) or <a class="reference external" href="https://github.com/conda-forge/miniforge/releases">Miniforge</a> (best)<a class="headerlink" href="#install-anamamba-large-or-minimamba-small-or-miniforge-best" title="Permalink to this heading">#</a></h2>
<div class="highlight-bash notranslate"><div class="highlight"><pre><span></span>wget<span class="w"> </span>https://github.com/conda-forge/miniforge/releases/latest/download/Mambaforge-Linux-x86_64.sh
bash<span class="w"> </span>Mambaforge-Linux-x86_64.sh<span class="w"> </span>-b
</pre></div>
</div>
Expand Down Expand Up @@ -574,7 +574,7 @@ <h2>Managing packages<a class="headerlink" href="#managing-packages" title="Perm
</div>
</div>
</div>
<p>Conda/Mamba displays a list of all packages with that name on mamba-forge repository, so we know it is available.</p>
<p>Conda/Mamba displays a list of all packages with that name on conda-forge repository, so we know it is available.</p>
<p>Install this package into the base environment:</p>
<div class="highlight-bash notranslate"><div class="highlight"><pre><span></span>mamba<span class="w"> </span>activate
mamba<span class="w"> </span>install<span class="w"> </span>-y<span class="w"> </span>jupyter<span class="w"> </span>
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6 changes: 3 additions & 3 deletions _sources/02-Installation.ipynb
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Expand Up @@ -17,10 +17,10 @@
"[Ref: Getting started with mamba](https://docs.mamba.io/projects/mamba/en/latest/user-guide/getting-started.html)\n",
"\n",
"<!-- #region {\"slideshow\": {\"slide_type\": \"slide\"}} -->\n",
"## Install [Anamamba](https://www.anamamba.com/downloads) (large) or [Minimamba](https://mamba.io/minimamba.html) (small) or [Miniforge](https://github.com/mamba-forge/miniforge/releases) (best)\n",
"## Install [Anamamba](https://www.anamamba.com/downloads) (large) or [Minimamba](https://mamba.io/minimamba.html) (small) or [Miniforge](https://github.com/conda-forge/miniforge/releases) (best)\n",
"\n",
"```bash\n",
"wget https://github.com/mamba-forge/miniforge/releases/latest/download/Mambaforge-Linux-x86_64.sh\n",
"wget https://github.com/conda-forge/miniforge/releases/latest/download/Mambaforge-Linux-x86_64.sh\n",
"bash Mambaforge-Linux-x86_64.sh -b\n",
"```"
]
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}
},
"source": [
"Conda/Mamba displays a list of all packages with that name on mamba-forge repository, so we know it is available.\n",
"Conda/Mamba displays a list of all packages with that name on conda-forge repository, so we know it is available.\n",
"\n",
"Install this package into the base environment:\n",
"\n",
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2 changes: 1 addition & 1 deletion quarto/01-GitBasics.html
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Expand Up @@ -615,7 +615,7 @@ <h2 class="anchored" data-anchor-id="commit-the-changes">Commit the changes</h2>
</section>
<section id="commit-or-fast-commit" class="level2">
<h2 class="anchored" data-anchor-id="commit-or-fast-commit">Commit or fast commit</h2>
<p><code>bwghbha images/index1.png :width: 400px</code> <code>bwghbha images/index2.png :width: 400px</code></p>
<p><code>qoalqyv images/index1.png :width: 400px</code> <code>qoalqyv images/index2.png :width: 400px</code></p>
</section>
<section id="merge-mybranch-with-the-master-branch" class="level2">
<h2 class="anchored" data-anchor-id="merge-mybranch-with-the-master-branch">Merge mybranch with the master branch</h2>
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6 changes: 3 additions & 3 deletions quarto/02-Installation.html
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Expand Up @@ -332,8 +332,8 @@ <h1 class="title">Installation</h1>
<p><a href="https://docs.mamba.io/projects/mamba/en/latest/user-guide/getting-started.html">Ref: Getting started with mamba</a></p>
<!-- #region {"slideshow": {"slide_type": "slide"}} -->
<section id="install-anamamba-large-or-minimamba-small-or-miniforge-best" class="level2">
<h2 class="anchored" data-anchor-id="install-anamamba-large-or-minimamba-small-or-miniforge-best">Install <a href="https://www.anamamba.com/downloads">Anamamba</a> (large) or <a href="https://mamba.io/minimamba.html">Minimamba</a> (small) or <a href="https://github.com/mamba-forge/miniforge/releases">Miniforge</a> (best)</h2>
<div class="sourceCode" id="cb1"><pre class="sourceCode bash code-with-copy"><code class="sourceCode bash"><span id="cb1-1"><a href="#cb1-1" aria-hidden="true" tabindex="-1"></a><span class="fu">wget</span> https://github.com/mamba-forge/miniforge/releases/latest/download/Mambaforge-Linux-x86_64.sh</span>
<h2 class="anchored" data-anchor-id="install-anamamba-large-or-minimamba-small-or-miniforge-best">Install <a href="https://www.anamamba.com/downloads">Anamamba</a> (large) or <a href="https://mamba.io/minimamba.html">Minimamba</a> (small) or <a href="https://github.com/conda-forge/miniforge/releases">Miniforge</a> (best)</h2>
<div class="sourceCode" id="cb1"><pre class="sourceCode bash code-with-copy"><code class="sourceCode bash"><span id="cb1-1"><a href="#cb1-1" aria-hidden="true" tabindex="-1"></a><span class="fu">wget</span> https://github.com/conda-forge/miniforge/releases/latest/download/Mambaforge-Linux-x86_64.sh</span>
<span id="cb1-2"><a href="#cb1-2" aria-hidden="true" tabindex="-1"></a><span class="fu">bash</span> Mambaforge-Linux-x86_64.sh <span class="at">-b</span></span></code><button title="Copy to Clipboard" class="code-copy-button"><i class="bi"></i></button></pre></div>
</section>
<section id="open-a-terminal-linuxmacosx-or-a-anamamba-prompt-windows" class="level2">
Expand Down Expand Up @@ -394,7 +394,7 @@ <h2 class="anchored" data-anchor-id="managing-packages">Managing packages</h2>
<div class="sourceCode cell-code" id="cb10"><pre class="sourceCode python code-with-copy"><code class="sourceCode python"><span id="cb10-1"><a href="#cb10-1" aria-hidden="true" tabindex="-1"></a><span class="op">%%</span>bash</span>
<span id="cb10-2"><a href="#cb10-2" aria-hidden="true" tabindex="-1"></a>mamba search jupyter </span></code><button title="Copy to Clipboard" class="code-copy-button"><i class="bi"></i></button></pre></div>
</div>
<p>Conda/Mamba displays a list of all packages with that name on mamba-forge repository, so we know it is available.</p>
<p>Conda/Mamba displays a list of all packages with that name on conda-forge repository, so we know it is available.</p>
<p>Install this package into the base environment:</p>
<div class="sourceCode" id="cb11"><pre class="sourceCode bash code-with-copy"><code class="sourceCode bash"><span id="cb11-1"><a href="#cb11-1" aria-hidden="true" tabindex="-1"></a><span class="ex">mamba</span> activate</span>
<span id="cb11-2"><a href="#cb11-2" aria-hidden="true" tabindex="-1"></a><span class="ex">mamba</span> install <span class="at">-y</span> jupyter </span></code><button title="Copy to Clipboard" class="code-copy-button"><i class="bi"></i></button></pre></div>
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6 changes: 3 additions & 3 deletions quarto/search.json
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"href": "02-Installation.html#install-anamamba-large-or-minimamba-small-or-miniforge-best",
"title": "Installation",
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"text": "Install Anamamba (large) or Minimamba (small) or Miniforge (best)\nwget https://github.com/mamba-forge/miniforge/releases/latest/download/Mambaforge-Linux-x86_64.sh\nbash Mambaforge-Linux-x86_64.sh -b"
"text": "Install Anamamba (large) or Minimamba (small) or Miniforge (best)\nwget https://github.com/conda-forge/miniforge/releases/latest/download/Mambaforge-Linux-x86_64.sh\nbash Mambaforge-Linux-x86_64.sh -b"
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"href": "02-Installation.html#managing-packages",
"title": "Installation",
"section": "Managing packages",
"text": "Managing packages\n\nCheck to see if a package you have not installed named “jupyter” is available from the Anamamba repository (must be connected to the Internet):\n\n\n%%bash\nmamba search jupyter \n\nConda/Mamba displays a list of all packages with that name on mamba-forge repository, so we know it is available.\nInstall this package into the base environment:\nmamba activate\nmamba install -y jupyter \n\nUpdate a new mamba environment from file\nIt is possible to create an environment from a file environment.yml. This file contains the packages list.\nname: exercices\nchannels:\n - conda-forge\ndependencies:\n - python=3.10\n - lorem\n - matplotlib\n - seaborn\n - pandas\nmamba env update -f environment.yml \nConda envs documentation.\nActivating the mamba environment will change your shell’s prompt to show what virtual environment you’re using, and modify the environment so that running python will get you that particular version and installation of Python.\n$ mamba activate py36\n(big-data) $ python\nPython 3.6.2 (default, Jul 17 2017, 16:44:45) \n[GCC 4.2.1 Compatible Apple LLVM 8.1.0 (clang-802.0.42)] on darwin\nType \"help\", \"copyright\", \"credits\" or \"license\" for more information.\n&gt;&gt;&gt; quit()\n\nYou must do this everytime you open a new terminal"
"text": "Managing packages\n\nCheck to see if a package you have not installed named “jupyter” is available from the Anamamba repository (must be connected to the Internet):\n\n\n%%bash\nmamba search jupyter \n\nConda/Mamba displays a list of all packages with that name on conda-forge repository, so we know it is available.\nInstall this package into the base environment:\nmamba activate\nmamba install -y jupyter \n\nUpdate a new mamba environment from file\nIt is possible to create an environment from a file environment.yml. This file contains the packages list.\nname: exercices\nchannels:\n - conda-forge\ndependencies:\n - python=3.10\n - lorem\n - matplotlib\n - seaborn\n - pandas\nmamba env update -f environment.yml \nConda envs documentation.\nActivating the mamba environment will change your shell’s prompt to show what virtual environment you’re using, and modify the environment so that running python will get you that particular version and installation of Python.\n$ mamba activate py36\n(big-data) $ python\nPython 3.6.2 (default, Jul 17 2017, 16:44:45) \n[GCC 4.2.1 Compatible Apple LLVM 8.1.0 (clang-802.0.42)] on darwin\nType \"help\", \"copyright\", \"credits\" or \"license\" for more information.\n&gt;&gt;&gt; quit()\n\nYou must do this everytime you open a new terminal"
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