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Rt notebook example #1522

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Rt notebook example #1522

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I-Bouros
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DavAug and others added 30 commits February 16, 2021 11:44
(Is there a better way to do this?)
Defer creation of toy problem to class; define function for specific method
- Simplified problem class
- Added Haario-Bardenet test for banana
- Added simple egg box problem
- Cleaned up KL divergence method
- Also added Hamiltonian func tests
MichaelClerx and others added 24 commits August 11, 2021 10:04
…thods they test (underscores instead of camelcase).
…n be called as e.g. 'differential_evaluation_mcmc.two_dim_gaussian()'.
Re-organisation/tidying of functional tests submodule
@I-Bouros I-Bouros requested a review from ben18785 March 22, 2024 13:19
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codecov bot commented Mar 22, 2024

Codecov Report

Attention: Patch coverage is 0% with 351 lines in your changes are missing coverage. Please review.

Project coverage is 96.46%. Comparing base (abcc8e5) to head (ba429ff).

Files Patch % Lines
pints/cptests/_problems.py 0.00% 78 Missing ⚠️
pints/cptests/mala_mcmc.py 0.00% 25 Missing ⚠️
pints/cptests/monomial_gamma_hamiltonian_mcmc.py 0.00% 25 Missing ⚠️
pints/cptests/relativistic_mcmc.py 0.00% 25 Missing ⚠️
pints/cptests/slice_stepout_mcmc.py 0.00% 25 Missing ⚠️
pints/cptests/emcee_hammer_mcmc.py 0.00% 22 Missing ⚠️
pints/cptests/_discovery.py 0.00% 16 Missing ⚠️
pints/cptests/differential_evolution_mcmc.py 0.00% 16 Missing ⚠️
pints/cptests/dream_mcmc.py 0.00% 16 Missing ⚠️
pints/cptests/haario_bardenet_acmc.py 0.00% 16 Missing ⚠️
... and 7 more
Additional details and impacted files
@@             Coverage Diff             @@
##              main    #1522      +/-   ##
===========================================
- Coverage   100.00%   96.46%   -3.54%     
===========================================
  Files           97      114      +17     
  Lines         9577     9928     +351     
===========================================
  Hits          9577     9577              
- Misses           0      351     +351     

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@MichaelClerx
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Hi @I-Bouros ! Looks like you branch off the 1294-functional-testing branch instead of main. You can see this here: https://github.com/pints-team/pints/network (although not very easily).
To fix this, please either 1; rebase to main (can be tricky) or 2; checkout main, create a new branch, add in the relevant files and create a new PR

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8 participants