SPLiT-Seq_demultiplexing_0.2.1

Major rewrite to increase speed, eliminate redundant steps, and implement parallelization of barcode extraction. Steps 1-4 were completely rewritten to replace search based barcode extraction with position based barcode extraction. On our cluster these modifications resulted in a 63X increase in speed when run on a single core and 67X increase when run on 4 cores. This faster version is accessible using --version fast.

SPLiT-Seq_demultiplexing_0.1.4

No recent changes have been included in this release. This release contains the fully functional version of SPLiT-Seq that has been available for some time. It is being created for archival purposes and to differentiate this original functional version from future upcoming releases that in which major changes will be made.