Skip to content
View pafonta's full-sized avatar

Organizations

@cognome @CulturalCompass
Block or Report

Block or report pafonta

Block user

Prevent this user from interacting with your repositories and sending you notifications. Learn more about blocking users.

You must be logged in to block users.

Please don't include any personal information such as legal names or email addresses. Maximum 100 characters, markdown supported. This note will be visible to only you.
Report abuse

Contact GitHub support about this user’s behavior. Learn more about reporting abuse.

Report abuse
pafonta/README.md

Welcome 👋

A growth mindset.

Love to build upon state-of-the-art research and cutting-edge Python technologies.

Expert in building AI solutions, from the vision to the algorithms by way of the architecture.

Specialized in making fast and easy to access and analyze knowledge hidden in large collections of text documents.

Experienced in both Natural Language Processing (NLP) and Knowledge Graphs (KG), with Deep Learning and Big Data.

Pinned

  1. pubmed_statistics.py pubmed_statistics.py
    1
    # For an example of use, see https://gist.github.com/pafonta/37762f56e8c1879569bca64901d0a000#gistcomment-3968062.
    2
    
                  
    3
    """Collect statistics on PubMed articles."""
    4
    
                  
    5
    from __future__ import annotations
  2. nlm_mesh.py nlm_mesh.py
    1
    # For an example of use, see https://gist.github.com/pafonta/162c1b9ec0380e95a017297a707a4d66#gistcomment-3935739.
    2
    
                  
    3
    """Find & Rank MeSH terms associated with an author."""
    4
    
                  
    5
    from __future__ import annotations
  3. nlm_mesh_tree.py nlm_mesh_tree.py
    1
    # For an example of use, see https://gist.github.com/pafonta/d33a0d5d849932f8ceab8b711d995497#gistcomment-3965575.
    2
    
                  
    3
    """Find MeSH terms in the MeSH tree simply (i.e. without using a graph)."""
    4
    
                  
    5
    from __future__ import annotations
  4. entity_linking.py entity_linking.py
    1
    # For an example of use, see https://gist.github.com/pafonta/21f3db4d9c31f6a1c2f7ede8cbf3406b#gistcomment-3970844.
    2
    
                  
    3
    """Entity Linking - Link mentions from texts to terms in ontologies.
    4
    5
    Use character-based embedding to handle plurals, misspellings, partial matches, ...
  5. r-lunch-10-04-18 r-lunch-10-04-18 Public

    Data Wrangling with dplyr and tidyr - An introduction -- R Lunch 10.04.18 @ UniGe

    Jupyter Notebook 1