Pinned

1. proteinsolver proteinsolver Public

   Graph neural network for generating novel amino acid sequences that fold into proteins with predetermined topologies.

   Jupyter Notebook 51 8

2. elaspic/elaspic2 elaspic/elaspic2 Public

   Predicting the effect of mutations on protein stability and protein binding affinity using pretrained neural networks and a ranking objective function.

   Jupyter Notebook 18 6

3. protein-adjacency-net protein-adjacency-net Public

   Classifier trained to predict whether a protein sequence matches an adjacency network and a GAN trained to fool the classifier.

   Jupyter Notebook 1

4. uniparc_xml_parser uniparc_xml_parser Public

   UniParc dataset describing ~300 million protein sequences converted into relational tables accessible through Google BigQuery (and as Parquet files).

   Rust 1

5. pmc-tables/pmc-tables pmc-tables/pmc-tables Public

   Extract relational tables from PubMed Central.

   Jupyter Notebook 1

6. csc343-ta-notes csc343-ta-notes Public

   Interactive tutorial notebooks for CSC343 - Introduction to Databases.

   Jupyter Notebook 16 5