GitHub - nimz/cs273b_preliminary: Preliminary project release code for Group 3.

README

Group 3 code for CS273B preliminary project report. All (mostly) completed models, evaluation codes, and data loading scripts are included here.

Authors: Nimit Sohoni, Ananthakrishnan Ganesan, Mindy Yang, Heather Blundell.

Name		Name	Last commit message	Last commit date
Latest commit History 3 Commits
README.md		README.md
a.csv		a.csv
all_histograms.py		all_histograms.py
create_indel_locations.py		create_indel_locations.py
cs273b.py		cs273b.py
entropy.py		entropy.py
entropy_execute.py		entropy_execute.py
indel_model.py		indel_model.py
indel_model_save_attention.py		indel_model_save_attention.py
load_coverage.py		load_coverage.py
load_dataset.py		load_dataset.py
load_full_dataset_sample.py		load_full_dataset_sample.py
lookup_gnomad.py		lookup_gnomad.py
lstm_attention.py		lstm_attention.py
lstm_attention2.py		lstm_attention2.py
make_histogram.py		make_histogram.py
make_histogram_all.py		make_histogram_all.py
process_genome_preds.py		process_genome_preds.py
rateconv.py		rateconv.py
saliency.py		saliency.py
simple_conv.py		simple_conv.py
simple_conv_coverage.py		simple_conv_coverage.py
simple_conv_entropy.py		simple_conv_entropy.py
simple_conv_entropy_coverage.py		simple_conv_entropy_coverage.py
simple_conv_predict.py		simple_conv_predict.py
simple_conv_triclass.py		simple_conv_triclass.py
simple_fcn.py		simple_fcn.py
simple_lstm.py		simple_lstm.py
split_conv.py		split_conv.py
utils.py		utils.py
visualization.py		visualization.py