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[ENH] Adapt FirstLevelModel to work with surface data objects from new API #4126

Merged
merged 46 commits into from
Jun 4, 2024
Merged

[ENH] Adapt FirstLevelModel to work with surface data objects from new API #4126

merged 46 commits into from
Jun 4, 2024

Commits on Nov 30, 2023

  1. Add masker structure

    ymzayek committed Nov 30, 2023
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  2. Define surfaceimage

    ymzayek committed Nov 30, 2023
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  3. Update

    ymzayek committed Nov 30, 2023
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Commits on Dec 6, 2023

  1. Update docstring

    ymzayek committed Dec 6, 2023
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  2. Skip niimg checks if surface

    ymzayek committed Dec 6, 2023
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Commits on Dec 7, 2023

  1. Fix code breaking tests

    ymzayek committed Dec 7, 2023
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  2. Merge branch 'main' into flm_surfaceimage

    ymzayek committed Dec 7, 2023
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  3. Add some tests

    ymzayek committed Dec 7, 2023
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  4. Add more tests

    ymzayek committed Dec 7, 2023
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  5. Refactor tests

    ymzayek committed Dec 7, 2023
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Commits on Dec 8, 2023

  1. Replace parameters for fitted surface masker

    ymzayek committed Dec 8, 2023
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  2. Add test

    ymzayek committed Dec 8, 2023
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  3. Remove breakpoint

    ymzayek committed Dec 8, 2023
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  4. Adapt compute contrast

    ymzayek committed Dec 8, 2023
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Commits on Dec 11, 2023

  1. Handle one hemisphere

    ymzayek committed Dec 11, 2023
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Commits on Jan 8, 2024

  1. Merge branch 'main' into flm_surfaceimage

    ymzayek committed Jan 8, 2024
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  2. Refactor

    ymzayek committed Jan 8, 2024
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  3. Resolve surface case for default mask

    ymzayek committed Jan 8, 2024
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  4. Fix doctsring

    ymzayek committed Jan 8, 2024
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Commits on Jan 9, 2024

  1. Added GLM example

    @bthirion
    bthirion authored and ymzayek committed Jan 9, 2024
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  2. Remove default arg

    ymzayek committed Jan 9, 2024
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  3. Fix conflict

    ymzayek committed Jan 9, 2024
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  4. Merge branch 'main' into flm_surfaceimage

    @ymzayek
    ymzayek committed Jan 9, 2024
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  5. Formatting

    ymzayek committed Jan 9, 2024
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  6. Working report with no plots

    ymzayek committed Jan 9, 2024
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Commits on Jan 10, 2024

  1. Allow black on example

    ymzayek committed Jan 10, 2024
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Commits on Jan 11, 2024

  1. Revert "Working report with no plots" 

    This reverts commit 5f80c63.
    ymzayek committed Jan 11, 2024
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  2. NotImplementedError for reports

    ymzayek committed Jan 11, 2024
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  3. Move test

    ymzayek committed Jan 11, 2024
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Commits on Jan 12, 2024

  1. Add test

    ymzayek committed Jan 12, 2024
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Commits on Jan 16, 2024

  1. Clarify doctsring

    ymzayek committed Jan 16, 2024
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  2. Refactor mask application

    ymzayek committed Jan 16, 2024
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  3. Method name and docstring

    ymzayek committed Jan 16, 2024
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Commits on Jan 17, 2024

  1. Merge branch 'main' into flm_surfaceimage

    @Remi-Gau
    Remi-Gau committed Jan 17, 2024
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Commits on Jan 26, 2024

  1. extract example as experimental

    @Remi-Gau
    Remi-Gau committed Jan 26, 2024
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  2. move example

    @Remi-Gau
    Remi-Gau committed Jan 26, 2024
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  3. update bids example

    @Remi-Gau
    Remi-Gau committed Jan 26, 2024
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  4. clean up

    @Remi-Gau
    Remi-Gau committed Jan 26, 2024
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  5. Merge remote-tracking branch 'upstream/main' into pr/ymzayek/4126

    @Remi-Gau
    Remi-Gau committed Jan 26, 2024
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  6. adapt fetcher

    @Remi-Gau
    Remi-Gau committed Jan 26, 2024
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  7. use confounds

    @Remi-Gau
    Remi-Gau committed Jan 26, 2024
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Commits on May 31, 2024

  1. Merge branch 'main' into flm_surfaceimage

    @Remi-Gau
    Remi-Gau committed May 31, 2024
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Commits on Jun 3, 2024

  1. Merge branch 'main' into flm_surfaceimage

    @Remi-Gau
    Remi-Gau committed Jun 3, 2024
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  2. fix test

    @Remi-Gau
    Remi-Gau committed Jun 3, 2024
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  3. fix examples

    @Remi-Gau
    Remi-Gau committed Jun 3, 2024
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  4. refactor

    @Remi-Gau
    Remi-Gau committed Jun 3, 2024
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