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Better examples, ANTSpy, microscopy tools

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@piloubazin piloubazin released this 23 Jun 12:18
· 3 commits to release-1.5.0 since this release
837d7e1

In this release we included a new series of examples using down-scaled data for faster testing of the nighres installation and core algorithms. Most of them should run on a laptop! The old, full resolution examples are still available.

The ANTS utilities in the registration tools now use ANTSpy, which is generally easier to install. The corresponding modules are identical except that 'antsreg' is replaced by 'antspy'.

New features have been added to the registration modules, among others one to automatically select the number of multiscale steps in ANTS based on a desired scaling factor, and one to build smooth transitions of a given thickness at the edge of a mask.

New tools for processing microscopy data have been added, from slice-to-slice intensity normalization to line feature detection and non-local interpolation. Many of these tools work in 2D, 2.5D and 3D.