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13 Open 210 Closed
13 Open 210 Closed
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Issues list

Upgrade to nf-validation 2.0
#479 opened Mar 15, 2024 by rannick
@rannick
Fusioncatcher build fails bug Something isn't working question Further information is requested
#478 opened Mar 15, 2024 by apeltzer
@rannick
6
Move previous tests for inputs into the format of template 2.13.1
#476 opened Mar 6, 2024 by rannick
Update STAR-Fusion
#469 opened Feb 16, 2024 by rannick
@rannick
ARRIBA_VISUALISATION : Process exceeded running time limit (8h) bug Something isn't working wontfix This will not be worked on
#449 opened Nov 28, 2023 by ZheFrench
9
Migrate local modules to nf-core/modules
#448 opened Nov 27, 2023 by rannick
8 of 9 tasks
4.0.0
@rannick
Add JAFFA subworkflow in rnafusion
#442 opened Nov 24, 2023 by yiyinzhang
Use references from CTAT
#438 opened Nov 20, 2023 by rannick 2.4.0
@rannick
2
Optimise STAR parameters to require only one STAR alignment
#436 opened Nov 15, 2023 by joshua-biocoder
@rannick
1
Add support for GRCh37
#431 opened Nov 7, 2023 by rannick
Harmonise channel naming system
#392 opened Sep 4, 2023 by rannick 3.0.0
@rannick
Parameters for running pipeline with ArcherDx data wontfix This will not be worked on
#371 opened Jun 27, 2023 by wudustan
3
Allow for spike-ins
#369 opened Jun 22, 2023 by fevac 3.0.0
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